Job Description P22634 Confidence 51.25% Date Thu Jan 5 11:39:02 GMT 2012 Rank 107 Aligned Residues 202 % Identity 13% Template c2xdqA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:light-independent protochlorophyllide reductase subunit n; PDBTitle: dark operative protochlorophyllide oxidoreductase (chln-2 chlb)2 complex Resolution 2.40 Å

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.									100	.	.	.	.	.	.	.	.	.	110	.	.	.	.													.	.	.	.	.	120	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.
Query Sequence		V	E	R	V	V	A	I	V	T	A	V	Q	E	R	Y	P	L	A	L	A	V	V	A	C	N	T	A	S	T	V	S	.	.	.	.	.	.	.	.	L	P	A	L	R	E	K	F	D	F	P	V	V	G	V	.	.	.	.	.	.	.	.	.	.	.	.	V	P	A	I	K	P	A	A	.	.	.	.	.	.
Query Conservation																																	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.
Alig confidence																								.									.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.
Template Conservation																								.
Template Sequence		Y	E	E	L	K	R	L	C	L	E	I	K	R	D	R	N	P	S	V	I	V	W	.	I	G	T	C	T	T	E	I	I	K	M	D	L	E	G	L	A	P	K	L	E	A	E	I	G	I	P	I	V	V	A	R	A	N	G	L	D	Y	A	F	T	Q	G	E	D	T	V	L	A	A	M	A	A	R	C	P	T
Template Known Secondary structure																			S					.									T	T															S	S									T	T	T			T	T												T	T
Template Predicted Secondary structure																								.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
				123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	R	L	T	A	N	G	I	V	G	L	L	A	T	R	G	T	V	K	R	S	Y	T	H	E	L	I	A	R	F	A	N	E	C	Q	I	E	M	L	G	S	A	E	M	V	E	L	A	E	A	K	L	H	G	E	D	V	S	L	D	A	L	K	R	I	L	R	P	W	L	R	M	K	E	P	P	D	T	V
Query Conservation		.	.
Alig confidence		.	.																																				.
Template Conservation																																							.
Template Sequence		S	T	Q	Y	H	P	H	P	P	L	V	L	F	G	S	L	P	D	P	V	V	T	Q	L	T	L	E	L	K	K	Q	G	I	K	V	S	G	.	W	L	P	A	K	R	Y	T	E	L	P	V	I	D	E	G	Y	Y	V	A	G	V	N	P	F	L	S	R	T	A	T	T	L	I	R	R	R	K	C	Q	L	I
Template Known Secondary structure							S								S															G	G	G	T						.			S		S	S	G	G	G						T	T						S	S	T	T											T	T
Template Predicted Secondary structure																																							.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		201	.	.	.					.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.
Query SS confidence						.	.	.	.
Query Sequence		V	L	G	C	.	.	.	.	T	H	F	P	L	L	Q	E	E	L	L	Q	V	L	P	E	G	T	R	L	V	D	S	G	A	A	I	A	R	R	T	A	W	L	L	E	H	E	A	P	D	A	K	S	A	D	A	N	I	A	F	C	M	A	M	T	P	G	A	E	Q	L	L	P	V	L	Q	R	Y	G	F	E
Query Conservation						.	.	.	.
Alig confidence						.	.	.	.																		.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.
Template Sequence		T	A	P	F	P	I	G	P	D	G	T	R	T	W	I	E	Q	I	C	A	T	F	G	I	Q	.	.	.	.	.	.	P	Q	G	L	A	E	R	E	A	E	T	W	Q	K	L	S	D	Y	L	E	L	V	R	G	K	S	V	F	F	M	G	D	N	L	L	E	I	S	L	A	R	F	L	I	R	C	G	M	R
Template Known Secondary structure						S	B																T	T			.	.	.	.	.	.			S											T	T								T	T									S	S												T	T
Template Predicted Secondary structure																											.	.	.	.	.	.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.							.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
		277	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		343	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions