Job Description P22634 Confidence 50.17% Date Thu Jan 5 11:39:02 GMT 2012 Rank 110 Aligned Residues 139 % Identity 12% Template c2wjxA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:glutamate receptor 2; PDBTitle: crystal structure of the human ionotropic glutamate2 receptor glur2 atd region at 4.1 a resolution Resolution 4.10 Å

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		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.																			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	A	I	V	T	A	V	Q	E	R	Y	P	L	A	L	A	V	V	A	C	N	T	A	S	T	V	S	L	P	A	L	R	E	K	F	D	F	P	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	V	P	A	I	K	P	A	A	R	L	T	A	N	G	I	V	G	L	L
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.
Template Sequence		V	T	N	A	F	C	S	Q	F	S	R	.	G	V	Y	A	I	F	G	F	Y	D	K	K	S	V	N	T	I	T	S	F	C	G	T	L	H	V	S	F	I	T	P	S	F	P	T	D	G	T	H	P	F	V	I	Q	M	R	P	D	L	K	G	A	L	L	S	L	I	E	Y	Y	Q	W	D	K	F	A	Y	L
Template Known Secondary structure													.	T		S								T	T	T												T							S				S	S			T	T					S														T	T
Template Predicted Secondary structure													.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		134	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		A	T	R	G	T	V	K	R	S	Y	.	.	T	H	E	L	I	A	R	F	A	N	E	C	Q	I	E	M	L	G	S	A	E	M	V	E	L	A	E	A	K	L	H	G	E	D	V	S	L	D	A	L	K	R	I	L	R	P	W	L	R	M	K	E	P	P	D	T	V	V	L	G	C	T	H	F	P	L	L	Q
Query Conservation												.	.
Alig confidence												.	.																					.	.	.	.	.	.	.	.	.	.	.																	.	.														.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.																	.	.														.
Template Sequence		Y	D	S	D	R	G	L	S	T	L	Q	A	V	L	D	S	A	A	E	K	K	W	Q	V	T	A	I	N	V	G	N	I	.	.	.	.	.	.	.	.	.	.	.	N	N	D	K	K	D	E	M	Y	R	S	L	F	Q	D	L	.	.	E	L	K	K	E	R	R	V	I	L	D	C	E	.	R	D	K	V	N
Template Known Secondary structure				T	T	S		S														T												.	.	.	.	.	.	.	.	.	.	.		S	S	T													.	.			T	T								S		.
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.																	.	.														.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.												.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.			200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	L	L	Q	V	L	P	E	G	T	R	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	I	V	D	Q	V	I	V	K	G	Y	H	Y	I
Template Known Secondary structure										T	T
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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