Job Description P22634 Confidence 84.69% Date Thu Jan 5 11:39:02 GMT 2012 Rank 39 Aligned Residues 134 % Identity 16% Template c2q5cA_ PDB info PDB header:transcription Chain: A: PDB Molecule:ntrc family transcriptional regulator; PDBTitle: crystal structure of ntrc family transcriptional regulator from2 clostridium acetobutylicum Resolution 1.49 Å

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.								.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																																																.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.
Query Sequence		V	E	R	V	V	A	I	V	T	A	V	Q	E	R	Y	P	L	A	L	A	V	V	A	C	N	T	A	S	T	V	S	L	P	A	L	R	E	K	F	D	F	P	V	V	G	V	.	.	.	.	.	.	.	V	P	A	I	K	P	A	A	R	L	T	A	N	G	I	V	G	L	L	A	T	R	G	T	V	K	R
Query Conservation																																																.	.	.	.	.	.	.
Alig confidence													.			.														.	.	.	.	.														.	.	.	.	.	.	.											.	.
Template Conservation													.			.														.	.	.	.	.																															.	.
Template Sequence		L	T	R	A	S	K	I	A	F	G	L	.	Q	D	.	E	V	D	A	I	I	S	R	G	A	T	S	D	.	.	.	.	.	Y	I	K	K	S	V	S	I	P	S	I	S	I	K	V	T	R	F	D	T	M	R	A	V	Y	N	A	K	R	F	.	.	G	N	E	L	A	L	I	A	Y	K	H	S	I	V	D
Template Known Secondary structure													.	T	T	.	T		S											.	.	.	.	.				T	T		S	S																				G	G	G	.	.		S								S	S		S	S
Template Predicted Secondary structure													.			.														.	.	.	.	.																															.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.		.	.		.	50	.	.	.	.	.	.	.	.	.	60	.						.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	T	H	E	L	I	A	R	F	A	N	E	C	Q	I	E	M	L	G	S	A	E	M	V	E	L	A	E	A	K	L	H	G	E	D	V	S	L	D	A	L	K	R	I	L	R	P	W	L	R	M	K	E	P	P	D	T	V	V	L	G	C	T	H	F	P	L	L	Q	E	E	L	L	Q	V	L	P	E	G
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.										.				.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.										.				.	.	.	.
Template Sequence		K	H	E	I	E	A	M	L	G	V	K	I	K	E	F	L	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	D	E	I	T	T	L	I	S	K	V	.	.	.	.	.	.	K	T	E	N	I	K	I	V	V	.	S	G	K	.	.	.	.	T	V	T	D	E	A	I	K	Q	G	L	Y
Template Known Secondary structure										T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	G	G									.	.	.	.	.	.			T	T						.				.	.	.	.									T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.										.				.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.																.	.	.	.	.	130	.	.	.	.	.	.							.	.	.	140	.	.	.	.	.		.	.	.					.	150	.	.	.	.	.	.	.	.	.	160
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	L	V	D	S	G	A	A	I	A	R	R	T	A	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	E	T	I	N	S	G	E	E	S	L	R	R	A	I	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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