Job Description P22634 Confidence 100.00% Date Thu Jan 5 11:39:02 GMT 2012 Rank 4 Aligned Residues 260 % Identity 28% Template c2jfqA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:glutamate racemase; PDBTitle: crystal structure of staphylococcus aureus glutamate2 racemase in complex with d-glutamate Resolution 2.15 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	P	T	V	L	V	F	D	S	G	V	G	G	L	S	V	Y	D	E	I	R	H	L	L	P	D	L	H	Y	I	Y	A	F	D	N	V	A	F	P	Y	G	E	K	S	E	A	F	I	V	E	R	V	V	A	I	V	T	A	V	Q	E	R	Y	P	L	A	L	A	V	V	A	C	N	T	A	S	T	V	S
Query Conservation
Alig confidence																																																																	.
Template Conservation																																																																	.
Template Sequence		M	N	K	P	I	G	V	I	D	S	G	V	G	G	L	T	V	A	K	E	I	M	R	Q	L	P	N	E	T	I	Y	Y	L	G	D	I	G	R	C	P	Y	G	P	R	P	G	E	Q	V	K	Q	Y	T	V	E	I	A	R	K	L	M	E	F	.	D	I	K	M	L	V	I	A	C	N	T	A	T	A	V	A
Template Known Secondary structure				S							S	S	S	T	T												T	T									T	T	T				T	T	S																	T	T	S	.			S
Template Predicted Secondary structure																																																																	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		L	P	A	L	R	E	K	F	D	F	P	V	V	G	V	V	.	P	A	I	K	P	A	A	R	L	T	A	N	G	I	V	G	L	L	A	T	R	G	T	V	K	R	S	Y	T	H	E	L	I	A	R	F	A	N	E	C	Q	I	E	M	L	G	S	A	E	M	V	E	L	A	E	A	K	L	H	G	E	D	V
Query Conservation																		.
Alig confidence																		.
Template Conservation
Template Sequence		L	E	Y	L	Q	K	T	L	S	I	S	V	I	G	V	I	E	P	G	A	R	T	A	I	M	T	T	R	N	Q	N	V	L	V	L	G	T	E	G	T	I	K	S	E	A	Y	R	T	H	I	K	R	I	N	P	H	V	E	V	H	G	V	A	C	P	G	F	V	P	L	V	E	Q	M	R	Y	S	D	P	T
Template Known Secondary structure										S	S					S													S	S	S														T											T	T									T	T							T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		179	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.
Predicted Secondary structure					.																																																																						.
Query SS confidence					.																																																																						.
Query Sequence		S	L	D	.	A	L	K	R	I	L	R	P	W	L	R	M	K	E	P	P	D	T	V	V	L	G	C	T	H	F	P	L	L	Q	E	E	L	L	Q	V	L	P	E	G	T	R	L	V	D	S	G	A	A	I	A	R	R	T	A	W	L	L	E	H	E	A	P	D	A	K	S	A	D	.	A	N	I	A	F	C
Query Conservation					.																																																																						.
Alig confidence					.											.	.																																																										.
Template Conservation																.	.
Template Sequence		I	T	S	I	V	I	H	Q	T	L	K	R	W	R	.	.	N	S	E	S	D	T	V	I	L	G	C	T	H	Y	P	L	L	Y	K	P	I	Y	D	Y	F	G	G	K	K	T	V	I	S	S	G	L	E	T	A	R	E	V	S	A	L	L	T	F	S	N	E	H	A	S	Y	T	E	H	P	D	H	R	F	F
Template Known Secondary structure												G	G	G	T	.	.	T		S		S						S	S	S	G	G	G	G								T	T	T		S																				T	T							S	S
Template Predicted Secondary structure																.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.			.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.			.	.	.	280	.	.	.	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		M	A	M	T	P	G	A	E	Q	L	L	P	V	L	Q	R	Y	G	F	E	.	.	T	L	E	K	L	A	V	L
Query Conservation																						.	.
Alig confidence			.	.																		.	.
Template Conservation			.	.
Template Sequence		A	.	.	T	G	D	T	T	H	I	T	N	I	I	K	E	W	L	N	L	S	V	N	V	E	R	I	S	V	N
Template Known Secondary structure			.	.	S	S
Template Predicted Secondary structure			.	.
Template SS confidence
		238			.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions