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Job DescriptionP22634
Confidence100.00%DateThu Jan 5 11:39:02 GMT 2012
Rank3Aligned Residues262
% Identity26%Templatec2jfoB_
PDB info PDB header:isomeraseChain: B: PDB Molecule:glutamate racemase; PDBTitle: crystal structure of enterococcus faecalis glutamate2 racemase in complex with d- and l-glutamate
Resolution2.5 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30.........40.........50.........60.........70.........80.........90.......
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Query Sequence  SEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERYPLALAVVACNTAST
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Template Sequence  SNQEA. IGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWEMADFLLKK. RIKMLVIACNTATA
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   2.... ...10.........20.........30.........40.........50.........60..... ....70.........
 
   98.100.........110..... ....120.........130.........140.........150.........160.........170......
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Query Sequence  VSLPALREKFDFPVVGVV. PAIKPAARLTANGIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGE
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Template Sequence  VALEEIKAALPIPVVGVILPGARAAVKVTKNNKIGVIGTLGTIKSASYEIAIKSKAPAIEVTSLACPKFVPIVESNQYRS
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   80.........90.........100.........110.........120.........130.........140.........150.........
 
   177..180.........190.........200.........210.........220.........230.........240.........250......
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Query Sequence  DVSLDALKRILRPWLRMKEPPDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFC
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Template Sequence  SVAKKIVAETLQALQ. . LKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDIAHTPEAPTQPHE
Template Known Secondary structure  TTGGG..GT

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   160.........170.... .....180.........190.........200.........210.........220.........230.......
 
   257..260.........270... ......280...
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Query Sequence  MAMTPGAEQLLPVLQRY. . . GFETLEKLAV
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Template Sequence  FYTTGSAKMFEEIASSWLGIENLKAQQIHL
Template Known Secondary structure  SS


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   238.240.........250.........260.......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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