Job Description P22634 Confidence 34.83% Date Thu Jan 5 11:39:02 GMT 2012 Rank 174 Aligned Residues 65 % Identity 22% Template c2iy3A_ PDB info PDB header:rna-binding Chain: A: PDB Molecule:signal recognition particle protein ffh; PDBTitle: structure of the e. coli signal recognition particle2 bound to a translating ribosome Resolution 16.00 Å

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		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.									.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.																					.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.																					.	.	.	.	.	.	.	.
Query Sequence		V	V	A	I	V	T	A	V	Q	E	R	Y	P	L	A	L	A	V	V	A	C	N	T	A	S	T	V	S	L	P	A	L	R	.	.	.	E	K	F	D	F	P	V	V	G	V	V	P	A	I	K	P	A	A	R	L	.	.	.	.	.	.	.	.	T	A	N	G	I	V	G	L	L	A	T	R	G
Query Conservation																																			.	.	.																					.	.	.	.	.	.	.	.
Alig confidence													.																						.	.	.																					.	.	.	.	.	.	.	.
Template Conservation													.
Template Sequence		A	A	K	L	A	L	Y	Y	K	G	K	.	G	R	R	P	L	L	V	A	A	D	T	Q	R	P	A	A	R	E	Q	L	R	L	L	G	E	K	V	G	V	P	V	L	E	V	M	D	G	E	S	P	E	S	I	R	R	R	V	E	E	K	A	R	L	E	A	R	D	L	I	L	V	D	T	A	G
Template Known Secondary structure												T	.	T										S	S																T								T	T																		T		S
Template Predicted Secondary structure													.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions