Job Description P22634 Confidence 100.00% Date Thu Jan 5 11:39:02 GMT 2012 Rank 16 Aligned Residues 209 % Identity 14% Template c2dx7B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:aspartate racemase; PDBTitle: crystal structure of pyrococcus horikoshii ot3 aspartate racemase2 complex with citric acid Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.							.	.	40	.	.	.	.	.							.	.	.	.	50	.	.	.	.	.	.				.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.									.	.	.	.	.	.												.	.	.
Query SS confidence																		.	.	.	.	.	.									.	.	.	.	.	.												.	.	.
Query Sequence		P	T	V	L	V	F	D	S	G	V	G	G	L	S	V	Y	.	.	.	.	.	.	D	E	I	R	H	L	L	P	.	.	.	.	.	.	D	L	H	Y	I	Y	A	F	D	N	V	.	.	.	A	F	P	Y	G	E	K	S	E	A	F	I	V	E	R	V	V	A	I	V	T	A	V	Q	E	R	Y	P	L	A
Query Conservation																		.	.	.	.	.	.									.	.	.	.	.	.												.	.	.
Alig confidence							.	.	.	.								.	.	.	.	.	.									.	.	.	.	.	.												.	.	.																								.
Template Conservation							.	.	.	.																																																																	.
Template Sequence		K	T	I	G	I	.	.	.	.	L	G	G	M	G	P	L	A	T	A	E	L	F	R	R	I	V	I	K	T	P	A	K	R	D	Q	E	H	P	K	V	I	I	F	N	N	P	Q	I	P	D	R	T	A	Y	I	L	G	K	G	E	D	P	R	P	Q	L	I	W	T	A	K	R	L	.	E	E	C	G	A	D
Template Known Secondary structure							.	.	.	.				S	S														T	S			S	S	G	G	G	S									T	T	S									S	S																.				T		S
Template Predicted Secondary structure							.	.	.	.																																																																	.
Template SS confidence
		2	.	.	.	.					.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	V	V	A	C	N	T	A	S	T	V	S	L	P	A	L	R	E	K	F	D	F	P	V	V	G	V	V	P	A	I	K	P	A	A	R	L	T	A	N	G	I	V	G	L	L	A	T	R	G	T	V	K	R	S	Y	T	H	E	L	I	A	R	F	A	N	E	C	Q	I	E	M	L	G	S	A	E	M	V
Query Conservation
Alig confidence												.
Template Conservation												.
Template Sequence		F	I	I	M	P	A	N	T	A	H	.	A	F	V	E	D	I	R	K	A	I	K	I	P	I	I	S	M	I	E	E	T	A	K	K	V	K	E	L	G	F	K	K	A	G	L	L	A	T	T	G	T	I	V	S	G	V	Y	E	K	E	F	S	K	Y	G	V	E	I	M	T	P	T	E	D	E	Q	K	D	V
Template Known Secondary structure								S	G	G	G	.	G	G									S	S		B														T	T		S														T									T	T
Template Predicted Secondary structure												.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
			167	.	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure		.											.	.
Query SS confidence		.											.	.
Query Sequence		.	E	L	A	E	A	K	L	H	G	E	.	.	D	V	S	L	D	A	L	K	R	I	L	R	P	W	L	R	M	K	E	P	P	D	T	V	V	L	G	C	T	H	F	P	L	L	Q	E	E	L	L	Q	V	L	P	E	G	T	R	L	V	D	S	G	A	A	I	A	R	R	T	A	W	L	L	E	H	E
Query Conservation		.											.	.
Alig confidence		.											.	.																.	.																							.	.	.	.
Template Conservation																														.	.																							.	.	.	.
Template Sequence		M	R	G	I	Y	E	G	V	K	A	G	N	L	K	L	G	R	E	L	L	L	K	T	A	K	I	L	E	.	.	E	R	G	A	E	C	I	I	A	G	C	T	E	V	S	V	V	L	K	Q	D	D	.	.	.	.	L	K	V	P	L	I	D	P	M	D	V	I	A	E	V	A	V	K	V	A	L	E	K
Template Known Secondary structure											T	T																		.	.		T	T		S	S					S									G	G	G	.	.	.	.		S	S																		T	T
Template Predicted Secondary structure																														.	.																							.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.			.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.					.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions