Job Description P22634 Confidence 73.42% Date Thu Jan 5 11:39:02 GMT 2012 Rank 59 Aligned Residues 161 % Identity 14% Template c2c4kD_ PDB info PDB header:regulatory protein Chain: D: PDB Molecule:phosphoribosyl pyrophosphate synthetase- PDBTitle: crystal structure of human phosphoribosylpyrophosphate2 synthetase-associated protein 39 (pap39) Resolution 2.65 Å

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		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.														.	.
Query SS confidence																																													.	.														.	.
Query Sequence		V	V	A	I	V	T	A	V	Q	E	R	Y	P	L	A	L	A	V	V	A	C	N	T	A	S	T	V	S	L	P	A	L	R	E	K	F	D	F	P	V	V	G	V	.	.	V	P	A	I	K	P	A	A	R	L	T	A	N	.	.	G	I	V	G	L	L	A	T	R	G	T	V	K	R	S	Y	T	H	E	L
Query Conservation																																													.	.														.	.
Alig confidence																							.	.			.	.	.																.	.														.	.								.
Template Conservation																							.	.			.	.	.																																								.
Template Sequence		V	C	K	L	L	A	S	M	L	A	K	A	G	L	T	H	I	I	T	M	D	.	.	L	H	.	.	.	Q	K	E	I	Q	G	F	F	S	F	P	V	D	N	L	R	A	S	P	F	L	L	Q	Y	I	Q	E	E	I	P	N	Y	R	N	A	V	I	V	A	.	K	S	P	D	A	A	K	R	A	Q	S	Y
Template Known Secondary structure													T									S	.	.		S	.	.	.	S	G	G	G	G	G	S		S	S																			S	T	T	G	G	G						.	S	S	G	G	G
Template Predicted Secondary structure																							.	.			.	.	.																																								.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.								.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																		.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.
Query Sequence		I	A	R	F	A	N	E	C	Q	I	E	M	L	G	S	A	.	.	.	.	.	.	.	E	M	V	E	L	A	E	A	K	L	H	G	E	D	V	S	L	D	A	L	K	R	I	L	R	P	W	L	R	M	K	E	P	P	D	T	V	V	L	G	C	T	H	F	P	L	L	Q	E	E	L	L	Q	V	L	P	E
Query Conservation																		.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.																								.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.
Template Sequence		A	E	R	L	R	L	G	L	A	V	I	H	P	P	I	T	V	V	G	D	V	G	G	R	I	A	I	I	V	D	D	I	I	D	D	V	E	S	F	V	A	A	A	E	I	L	.	.	.	.	.	.	K	E	R	G	A	Y	K	I	Y	V	M	A	T	H	G	I	L	S	A	E	A	P	R	L	I	E	E	S
Template Known Secondary structure						T														S			T	T								S			S	S	T											.	.	.	.	.	.		T	T	T															T	T								S
Template Predicted Secondary structure																																																.	.	.	.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.							.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
																							221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	R	L	V	D	S	G	A	A	I	A	R	R	T	A	W	L	L	E	H	E	A	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	V	D	E	V	V	V	T	N	T	V	P	H	E	V	Q	K	L	Q	C	P	K	I	K	T	V	D	I	S	L	I	L	S	E	A	I	R	R	I	H	N	G	E	S	M
Template Known Secondary structure		S								B	T	S										T	T																				T
Template Predicted Secondary structure
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions