Job Description P22634 Confidence 41.74% Date Thu Jan 5 11:39:02 GMT 2012 Rank 146 Aligned Residues 152 % Identity 11% Template c1u9yD_ PDB info PDB header:transferase Chain: D: PDB Molecule:ribose-phosphate pyrophosphokinase; PDBTitle: crystal structure of phosphoribosyl diphosphate synthase2 from methanocaldococcus jannaschii Resolution 2.65 Å

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		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	A	I	V	T	A	V	Q	E	R	Y	P	L	A	L	A	V	V	A	C	N	T	A	S	T	V	S	L	P	A	L	R	E	K	F	D	F	P	V	V	G	V	V	P	A	I	K	P	A	A	R	L	T	A	N	G	I	V	G	L	L	A	T	R	G	T	V	K	R	S	Y	T	H	E	L	I	A	R	F
Query Conservation
Alig confidence													.										.	.			.	.	.
Template Conservation													.										.	.			.	.	.
Template Sequence		S	I	R	A	L	A	K	I	Y	S	N	.	I	V	D	K	L	I	T	I	N	.	.	P	H	.	.	.	E	T	H	I	K	D	F	F	T	I	P	F	I	Y	G	D	A	V	P	K	L	A	E	Y	V	K	D	K	L	N	D	P	I	V	L	A	P	D	K	G	A	L	E	F	A	K	T	A	S	K	I	L
Template Known Secondary structure													.			S						S	.	.		S	.	.	.		G	G	G	G	G	G		S	S																T	T	T		S	S						S	S	G	G	G
Template Predicted Secondary structure													.										.	.			.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.			.	.				.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.							.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.																																																										.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.																																																										.	.	.	.	.	.	.
Query Sequence		A	N	E	C	Q	I	E	M	L	G	.	.	.	.	.	.	S	A	E	M	V	E	L	A	E	A	K	L	H	G	E	D	V	S	L	D	A	L	K	R	I	L	R	P	W	L	R	M	K	E	P	P	D	T	V	V	L	G	C	T	H	F	P	L	L	Q	E	E	L	L	Q	V	L	.	.	.	.	.	.	.
Query Conservation												.	.	.	.	.	.																																																										.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.																										.	.	.	.	.	.																											.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.
Template Sequence		N	A	E	Y	D	Y	L	E	I	A	P	K	T	L	D	A	K	D	R	D	V	F	I	V	D	D	I	I	S	T	G	G	T	M	A	T	A	V	K	L	L	.	.	.	.	.	.	K	E	Q	G	A	K	K	I	I	A	A	C	V	H	P	V	L	I	G	D	A	L	N	K	L	Y	S	A	G	V	E	E	V
Template Known Secondary structure		T						B				B	S	S				T	T											S	S	S											.	.	.	.	.	.			T	T															T	T									T		S
Template Predicted Secondary structure																																											.	.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.							.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
								219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	P	E	G	T	R	L	V	D	S	G	A	A	I	A	R	R	T
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.
Template Conservation
Template Sequence		V	G	T	D	T	Y	L	S	E	V	S	K	V	S	V	A	E	V	I	V	D	L	L
Template Known Secondary structure					T	T	S			T	T
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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