Job Description P22634 Confidence 52.84% Date Thu Jan 5 11:39:02 GMT 2012 Rank 104 Aligned Residues 98 % Identity 16% Template c1keeH_ PDB info PDB header:ligase Chain: H: PDB Molecule:carbamoyl-phosphate synthetase small chain; PDBTitle: inactivation of the amidotransferase activity of carbamoyl phosphate2 synthetase by the antibiotic acivicin Resolution 2.10 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	N	T	P	C	L	A	A	T	P	S	E	P	R	P	T	V	L	V	F	D	S	G	V	G	G	L	S	V	Y	D	E	I	R	H	L	L	P	D	L	H	Y	I	Y	A	F	D	N	V	A	F	P	Y	G	E	K	S	E	A	F	I	V	E	R	V	V	A	I	V	T	A	V	Q	E	R	Y	P	L	A
Query Conservation
Alig confidence																		.										.																		.	.	.	.	.	.	.	.					.							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.										.																		.	.	.	.	.	.	.	.					.							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	G	G	L	P	E	A	K	K	E	D	E	L	P	F	H	.	V	V	A	Y	D	F	G	A	K	.	R	N	I	L	R	M	L	V	D	R	G	C	R	L	T	I	V	.	.	.	.	.	.	.	.	P	A	Q	T	.	S	A	E	D	V	L	.	.	.	.	.	.	.	.	.	.	.	.	K	M	N	P	D
Template Known Secondary structure		T	T	B	S						G	G	G		S			.						S	S			.										T	T							.	.	.	.	.	.	.	.		T	T		.							.	.	.	.	.	.	.	.	.	.	.	.	T	T			S
Template Predicted Secondary structure																		.										.																		.	.	.	.	.	.	.	.					.							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.									220	.	.	.		.	.	.	.	.	.													230	.	.	.	.
		87	.	.	90	.				.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.			.															.	.
Query SS confidence							.	.	.			.															.	.
Query Sequence		L	A	V	V	A	.	.	.	C	N	.	T	A	S	T	V	S	L	P	A	L	R	E	K	F	.	.	D	F	P	V	V	G	V	V	P	A	I	K	P	A	A	R	L	T	A	N	G
Query Conservation							.	.	.			.															.	.
Alig confidence							.	.	.			.															.	.									.
Template Conservation																																					.
Template Sequence		G	I	F	L	S	N	G	P	G	D	P	A	P	C	D	Y	A	I	T	A	I	Q	K	F	L	E	T	D	I	P	V	F	G	I	L	.	G	H	Q	L	L	A	L	A	S	G	A	K
Template Known Secondary structure									S	B		S	T	T												T	T	S									.										T
Template Predicted Secondary structure																																					.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions