Return to main results Retrieve Phyre Job Id

Job DescriptionP0AG20
Confidence100.00%DateThu Jan 5 11:27:53 GMT 2012
Rank4Aligned Residues151
% Identity49%Templated1vj7a2
SCOP infoNucleotidyltransferase Nucleotidyltransferase RelA/SpoT domain
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   207..210.........220.........230.........240.........250.........260.........270.........280......
Predicted Secondary structure 












Query SS confidence 















































































Query Sequence  HPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERL
Query Conservation   
  
  
   
      

  
      
   
   

   
 

 
  



 

  
      
 
  
 



   
Alig confidence 


.











































































Template Conservation 
 
.
  
   
   
   
  
  
   
   
    
   
  


   

  

 

      
 

 




    
Template Sequence  ETE. FYKISHMMNEKRREREALVDDIVTKIKSYTTEQGLFGDVYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCVMETQ
Template Known Secondary structure 
.TTTT






GGG

TTGGG
SS
Template Predicted Secondary structure 

.










Template SS confidence 















































































   197.. 200.........210.........220.........230.........240.........250.........260.........270.....
 
   287..290.........300.........310.........320.........330.........340.........350.........360
Predicted Secondary structure 































Query SS confidence 









































































Query Sequence  QDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEG
Query Conservation   


  

 

    


  





 

 









 
  
   





  

  

 





 



Alig confidence 












































.






















.



Template Conservation   
   
   
           

 
  

  





  
     .  





  

 


 
 



.    
Template Sequence  SDVYAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTVYGPKG. PIEIQIRTKEMHQVAEYGVAANW. IKEL
Template Known Secondary structure  S
B
TT

TTTS

TT




SSS.TT


.
Template Predicted Secondary structure 






















.

.
Template SS confidence 









































































   276...280.........290.........300.........310.........320 .........330.........340... ....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions