 |
Job Description | P0AG20 | Confidence | 27.54% | Date | Thu Jan 5 11:27:53 GMT 2012 |
Rank | 225 | Aligned Residues | 39 |
% Identity | 28% | Template | d1rypc_ |
SCOP info | Ntn hydrolase-like
| N-terminal nucleophile aminohydrolases (Ntn hydrolases)
| Proteasome subunits
|
Resolution | 1.90 |
|
  |   |
402 | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | |
. | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
| . |  |  |  |
|  |  |  |  |  |  |  |
|
|  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | D | D | R | V | Y | V | F | T | P | K | G | D | V | V | D | L | P | A | G | S | T | P | L | D | F | A | Y | H | I | H | S | . |
D | V | G | H | R | C | I | G | A | K | I | G | G | R | I | V |
Query Conservation |   |
  |   |
|   |
|
|
|
|
|
|
|
|   |
|
|   |
|
|   |
|
|
|   |
|
|
|
|
|
|
|
|
| . |
|
|
|   |   |
|   |
|
|
|
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |   |
|
|
|   |
|
|
|   |
|
|
| . | . | . | . | . | . | . | . | . |
|
|   |   |
|   |   |   |
|   |
|   |
|
|
|
|   |   |
|
|
|
|
Template Sequence |   |
Y | D | S | R | T | T | I | F | S | P | E | G | R | L | Y | Q | V | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
Y | A | L | E | S | I | S | H | A | G | T | A | I | G | I | M | A | S | D | G | I | V |
Template Known Secondary structure |   |
G |
|
|
| T | T |
| B |
| T | T | S |
| B |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  | T | T | S |
|
|  |  |  |  |  |  | T | T |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|