Job Description P0AG20 Confidence 29.76% Date Thu Jan 5 11:27:53 GMT 2012 Rank 219 Aligned Residues 68 % Identity 13% Template c3pvpA_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:chromosomal replication initiator protein dnaa; PDBTitle: structure of mycobacterium tuberculosis dnaa-dbd in complex with box22 dna Resolution 2.30 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	A	S	L	L	L	W	R	G	V	E	M	V	E	I	L	S	T	L	S	M	D	I	D	T	L	R	A	A	L	L	F	P	L	A	D	A	N	V	V	S	E	D	V	L	R	E	S	V	G	K	S	V	V	N	L	I	H	G	V	R	D	M	A	A	I	R	Q	L	K	A	T	H	T	D	S	V	S	S
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.
Template Sequence		P	G	K	T	R	A	L	A	Q	S	R	Q	I	A	M	Y	L	C	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	T	D	L	S	L	P	K	I	G	Q	A	F	G	R	D	H	T	T	V	M	Y	A	Q	R	K	I	L	S	E	M	A	.	.	.	.	.	E	R	R	E	V	F
Template Known Secondary structure		S																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T																			.	.	.	.	.
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.
Template SS confidence
		434	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.																		.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.						.	.	.	.	490	.
		130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	V	D	N	V	R	R	M	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	H	V	K	E	L	T	T	R	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		492	.	.	.	.	.	.	.	500	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions