 |
Job Description | P0AG20 | Confidence | 31.73% | Date | Thu Jan 5 11:27:53 GMT 2012 |
Rank | 211 | Aligned Residues | 36 |
% Identity | 25% | Template | c3h4pB_ |
PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:proteasome subunit alpha; |
PDBTitle: proteasome 20s core particle from methanocaldococcus2 jannaschii
|
Resolution | 4.10 Å |
|
  |   |
406 | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |
|  |  |  |  |  |  |  |
|
|  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | Y | V | F | T | P | K | G | D | V | V | D | L | P | A | G | S | T | P | L | D | F | A | Y | H | I | H | S | D | V | G | H | R | C | I | G | A | K | I | G | G | R | I | V |
Query Conservation |   |
|
|
|
|
|
|
|
|   |
|
|   |
|
|   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |
|
|
|
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|
|   |
|   |
|   |
|
| . | . | . | . | . | . | . |
|
|
|   |   |
| . |   |   |   |
|   |
|   |
|
|
|
|   |   |
|
|
|
|
Template Sequence |   |
I | T | V | F | S | P | E | G | R | L | Y | Q | V | . |
. |
. |
. |
. |
. |
. |
E | Y | A | R | E | A | . |
V | R | R | G | T | T | A | I | G | I | A | C | K | D | G | V | V |
Template Known Secondary structure |   |
|
|
|
|
| S | S | S | S |
|  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  | . |  |  |  | S |
|  |  |  |  |  |
|
| S | S |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |
|
|
|
|
|  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  | . |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | 30 | . | |
. | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|