Job Description P0AG20 Confidence 30.63% Date Thu Jan 5 11:27:53 GMT 2012 Rank 214 Aligned Residues 141 % Identity 21% Template c3a5iB_ PDB info PDB header:protein transport Chain: B: PDB Molecule:flagellar biosynthesis protein flha; PDBTitle: structure of the cytoplasmic domain of flha Resolution 2.80 Å

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		72	.	.	.	.	.	.	.	80	.	.	.	.	.											.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.																																																							.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.																																																							.	.
Query Sequence		D	I	D	T	L	R	A	A	L	L	F	P	L	A	.	.	.	.	.	.	.	.	.	.	D	A	N	V	V	S	E	D	V	L	R	E	S	V	G	K	S	V	V	N	L	I	H	G	V	R	D	M	A	A	I	R	Q	L	K	A	T	H	T	D	S	V	S	S	E	Q	V	D	N	V	R	R	M	L	.	.
Query Conservation																.	.	.	.	.	.	.	.	.	.																																																							.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	S	T	V	V	A	T	H	L	N	H	L	I	G	Q	F	S	A	E	L	F	G	R	Q	E	A	Q	Q	L	L	D	R	V	S	Q	E	M	P	K	L	T	E	D	L	V	P	G	V	V	T	L	T	T	L	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	V	L	Q	N	L	L	A	E
Template Known Secondary structure																																					T	T							T						S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		483	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.																.	540	.	.	.	.	.	.	.
			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.							.	.	.	.	210	.	.
Predicted Secondary structure		.																																																																			.	.	.	.	.	.
Query SS confidence		.																																																																			.	.	.	.	.	.
Query Sequence		.	L	A	M	V	D	D	F	R	C	V	V	I	K	L	A	E	R	I	A	H	L	R	E	V	K	D	A	P	E	D	E	R	V	L	A	A	K	E	C	T	N	I	Y	A	P	L	A	N	R	L	G	I	G	Q	L	K	W	E	L	E	D	Y	C	F	R	Y	.	.	.	.	.	.	L	H	P	T	E	Y	K
Query Conservation		.																																																																			.	.	.	.	.	.
Alig confidence		.				.																																																															.	.	.	.	.	.
Template Conservation						.
Template Sequence		K	V	P	I	.	R	D	M	R	T	I	L	E	T	L	A	E	H	A	P	L	Q	S	D	P	H	E	L	T	A	V	V	R	V	A	L	G	R	A	I	T	Q	Q	W	F	P	G	N	E	E	V	Q	V	I	G	L	D	T	A	L	E	R	L	L	L	Q	A	L	Q	G	G	G	G	L	E	P	G	L	A	D
Template Known Secondary structure		T				.														G	G	G															T									S		S	S																						T		S
Template Predicted Secondary structure						.
Template SS confidence
		548	.	550	.		.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	A	K	L	L	H	E	R	R	L	D	R	E	H	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	L	A	Q	T	Q	E	A	L	S	R	Q	E	M	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		627	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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