Job Description P0AG20 Confidence 36.53% Date Thu Jan 5 11:27:53 GMT 2012 Rank 196 Aligned Residues 135 % Identity 20% Template c2x49A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:invasion protein inva; PDBTitle: crystal structure of the c-terminal domain of inva Resolution 1.50 Å

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		72	.	.	.	.	.	.	.	80	.	.	.	.	.											.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.																																																							.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.																																																							.	.
Query Sequence		D	I	D	T	L	R	A	A	L	L	F	P	L	A	.	.	.	.	.	.	.	.	.	.	D	A	N	V	V	S	E	D	V	L	R	E	S	V	G	K	S	V	V	N	L	I	H	G	V	R	D	M	A	A	I	R	Q	L	K	A	T	H	T	D	S	V	S	S	E	Q	V	D	N	V	R	R	M	L	.	.
Query Conservation																.	.	.	.	.	.	.	.	.	.																																																							.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.																								.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Template Conservation																																																	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	A	L	D	E	L	Y	H	C	L	A	V	T	L	A	R	N	V	N	E	Y	F	G	I	Q	E	T	K	H	M	L	D	Q	L	E	A	K	F	P	D	L	L	K	E	V	L	R	.	H	A	T	V	Q	R	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	L	Q	R	L	L	S	E
Template Known Secondary structure																		T	G	G	G	T		S													T	T										T	.	T	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T
Template Predicted Secondary structure																																																	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		476	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.		.	.	.	.	.	.	.	530																.	.	.	.	.	.	.	.	.
			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.												.	.	.
Predicted Secondary structure		.																																																																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																																																																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	L	A	M	V	D	D	F	R	C	V	V	I	K	L	A	E	R	I	A	H	L	R	E	V	K	D	A	P	E	D	E	R	V	L	A	A	K	E	C	T	N	I	Y	A	P	L	A	N	R	L	G	I	G	Q	L	K	W	E	L	E	D	Y	C	F	R	.	.	.	.	.	.	.	.	.	.	.	Y	L	H
Query Conservation		.																																																																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.				.																																										.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.																																										.
Template Sequence		R	V	S	V	.	R	N	M	K	L	I	M	E	A	L	A	L	W	A	P	R	E	K	D	V	I	N	L	V	E	H	I	R	G	A	M	A	R	Y	I	C	H	K	F	A	N	.	G	G	E	L	R	A	V	M	V	S	A	E	V	E	D	V	I	R	K	G	I	R	Q	T	S	G	S	T	F	L	S	L	D
Template Known Secondary structure		T				.														T	T	T															T										T	.	T	S																							S	S
Template Predicted Secondary structure						.																																										.
Template SS confidence
		540	.	.	.		.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.		.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	E	Y	K	R	I	A	K	L	L	H	E	R	R	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	E	A	S	A	N	L	M	D	L	I	T	L	K	L	D	D
Template Known Secondary structure																	T	T
Template Predicted Secondary structure
Template SS confidence
		618	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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