Job Description P0AG20 Confidence 52.02% Date Thu Jan 5 11:27:53 GMT 2012 Rank 154 Aligned Residues 70 % Identity 19% Template c2e1cA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:putative hth-type transcriptional regulator ph1519; PDBTitle: structure of putative hth-type transcriptional regulator ph1519/dna2 complex Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		665	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	L	V	V	R	V	V	A	N	D	R	S	G	L	L	R	D	I	T	T	I	L	A	N	E	K	V	N	V	L	G	V	A	S	R	S	D	T	K	Q	Q	L	A	T	I	D	M	T	I	E	I	Y	N	L	Q	V	L	G	R	V	L	G	K	L	N	Q	V	P	D	V	I	D	A	R
Query Conservation
Alig confidence																											.												.	.	.	.
Template Conservation																											.												.	.	.	.
Template Sequence		Y	S	M	L	A	F	I	L	V	K	V	K	A	G	K	Y	S	E	V	A	S	N	L	A	K	.	Y	P	E	I	V	E	V	Y	E	T	T	.	.	.	.	G	D	Y	D	M	V	V	K	I	R	T	K	N	S	E	E	L	N	N	F	L	D	L	I	G	S	I	P	G	V	E	G	T	H
Template Known Secondary structure														T	T											T	.	S	T	T								S	.	.	.	.	S	S	S	S								S	S														S	T	T
Template Predicted Secondary structure																											.												.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120					.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions