 |
Job Description | P0AG20 | Confidence | 73.99% | Date | Thu Jan 5 11:27:53 GMT 2012 |
Rank | 98 | Aligned Residues | 63 |
% Identity | 21% | Template | c2bs2E_ |
PDB info |
PDB header:oxidoreductase | Chain: E: PDB Molecule:quinol-fumarate reductase iron-sulfur subunit b; |
PDBTitle: quinol:fumarate reductase from wolinella succinogenes
|
Resolution | 1.78 Å |
|
 |
  |   |
405 | . | . | . | . | 410 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | |
|
|
|
. | . | . | . | . | . | . | 440 | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | |
450 | . | . | . | . | . | . | . | . | . | 460 | . |
Predicted Secondary structure |   |
|
|  |  |  |
|
|
|
|
|  | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
| . | . | . | . |
|  |  |  |
|  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |
|
|  |  |
| . |
|
|
|
|
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | V | Y | V | F | T | P | K | G | D | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
V | D | L | P | A | G | S | T | P | L | D | F | A | Y | H | I | H | . |
. |
. |
. |
S | D | V | G | H | R | C | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
G | A | K | I | G | G | R | I | V | . |
P | F | T | Y | Q | L | Q | M | G | D | Q | I |
Query Conservation |   |
  |
|
|
|
|
|
|
|
|   |
| . | . | . | . | . | . | . | . | . |
|   |
|
|   |
|
|
|   |
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|   |   |
|   | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|   |   |
| . |
|
|   |
|   |
|
|   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|
|
|
|
|
|   |   |
|   |   |   |   |
|
|
|
|   |
|   |   |   |
|   |   |
|   |
|
|   |
|   |
|   |
|
|
|   |   |   |
|
|
|   |
|   |
|   |   |   |   |   |   |
Template Sequence |   |
R | V | F | K | Y | D | P | Q | S | A | V | S | K | P | H | F | Q | E | Y | K | I | E | E | A | P | S | M | T | I | F | I | V | L | N | M | I | R | E | T | Y | D | P | D | L | N | F | D | F | V | C | R | A | G | I | C | G | S | C | G | M | M | I | N | G | R | P | S | L | A | C | R | T | L | T | K | D | F | E | D | G |
Template Known Secondary structure |   |
 |  |  |  |
|
| T | T |
| T | T |
|
|
|  |  |  |  |  |  |  |  |
|
| T | T |
| B |  |  |  |  |  |  |  |  |  |  |  | T |
| T | T |
|
|
|
|
| S | S | S | S | S | S | S |
| T | T |  |  |  |  | T | T |  |  |  |  | G | G | G |
| B | G | G | G |
| T | T | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |
|  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
  |
  |   |
462 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
Query Sequence |   |
E | I | I | T | Q | K |
Query Conservation |   |
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|
|
Template Sequence |   |
V | I | T | L | L | P |
Template Known Secondary structure |   |
 |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
  |   |
88 | . | 90 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|