Return to main results Retrieve Phyre Job Id

Job DescriptionP0AG20
Confidence64.36%DateThu Jan 5 11:27:53 GMT 2012
Rank130Aligned Residues23
% Identity22%Templatec1yj5C_
PDB info PDB header:transferaseChain: C: PDB Molecule:5' polynucleotide kinase-3' phosphatase fha domain; PDBTitle: molecular architecture of mammalian polynucleotide kinase, a dna2 repair enzyme
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   441........450 .........460...
Predicted Secondary structure 



..








Query SS confidence 









. .












Query Sequence  GAKIGGRIVP. . FTYQLQMGDQIEI
Query Conservation 





  

..
 
 

 

 


Alig confidence 









..












Template Conservation 

 


  
       
  

 
 
Template Sequence  PSTVGVHELKPGLSGSLSLGDVLYL
Template Known Secondary structure 

TT

TT

TT
S
Template Predicted Secondary structure 








Template SS confidence 
























   71........80.........90.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions