Return to main results Retrieve Phyre Job Id

Job DescriptionP0AG20
Confidence100.00%DateThu Jan 5 11:27:53 GMT 2012
Rank1Aligned Residues299
% Identity39%Templatec1vj7B_
PDB info PDB header:hydrolase, transferaseChain: B: PDB Molecule:bifunctional rela/spot; PDBTitle: crystal structure of the bifunctional catalytic fragment of relseq,2 the rela/spot homolog from streptococcus equisimilis.
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20..... ....30.........40.. .......50.........60.........70.........80.........90.
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Query Sequence  FDPEKWIASLG. ITSQKSCECLAETWAYC. . LQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVS
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Template Sequence  LTGEEVVALAAKYMNETDAAFVKKALDYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLHDVVEDTDIT
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TTT
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TTSSBTTTT

STTSS

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   7..10.........20.........30.........40.........50.........60.........70.........80......
 
   92.......100.........110.........120.........130.........140.........150.........160.........170.
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Query Sequence  EDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDER
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Template Sequence  LDNIEFDFGKDVRDIVDGVTKLGKV. . . . . . . . . . . . . . . . . . . . . . . . . ESKDIRVILVKLADRLHNMRTLKHLRKDKQ
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TGGGS
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   87..90.........100.........110. ........120.........130.........140.
 
   172.......180.........190.........200.........210.........220.........230.........240.........250.
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Query Sequence  VLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYG
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Template Sequence  ERISRETMEIYAPLAHRLGISRIKWELEDLAFRYLNETEFYKISHMM. . . . . . NEKLVDDIVTKIKSYTTEQGLFGDVYG
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   161........170.........180.........190.........200....... ..210.........220.........230....
 
   252.......260.........270.........280.........290.........300.........310.........320.........330.
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Query Sequence  RPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGG
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Template Sequence  RPKHIYSIYRKM. . . . . . . . RIFDLIAIRCVMETQSDVYAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTVYGPKG
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   241........250.. .......260.........270.........280.........290.........300.........310..
 
   332.......340.........350.....
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Query Sequence  KTVEIQIRTKQMHEDAELGVAAHW
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Template Sequence  . PIEIQIRTKEMHQVAEYGVA. . W
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   321........330.........340 .
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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