Job Description P0AG20 Confidence 100.00% Date Thu Jan 5 11:27:53 GMT 2012 Rank 1 Aligned Residues 299 % Identity 39% Template c1vj7B_ PDB info PDB header:hydrolase, transferase Chain: B: PDB Molecule:bifunctional rela/spot; PDBTitle: crystal structure of the bifunctional catalytic fragment of relseq,2 the rela/spot homolog from streptococcus equisimilis. Resolution 2.10 Å

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		15	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure													.																		.	.
Query SS confidence													.																		.	.
Query Sequence		F	D	P	E	K	W	I	A	S	L	G	.	I	T	S	Q	K	S	C	E	C	L	A	E	T	W	A	Y	C	.	.	L	Q	Q	T	Q	G	H	P	D	A	S	L	L	L	W	R	G	V	E	M	V	E	I	L	S	T	L	S	M	D	I	D	T	L	R	A	A	L	L	F	P	L	A	D	A	N	V	V	S
Query Conservation													.																		.	.
Alig confidence													.																		.	.
Template Conservation
Template Sequence		L	T	G	E	E	V	V	A	L	A	A	K	Y	M	N	E	T	D	A	A	F	V	K	K	A	L	D	Y	A	T	A	A	H	F	Y	Q	V	R	K	S	G	E	P	Y	I	V	H	P	I	Q	V	A	G	I	L	A	D	L	H	L	D	A	V	T	V	A	C	G	F	L	H	D	V	V	E	D	T	D	I	T
Template Known Secondary structure															S																			T	T	T		B		T	T	S	S	B	T	T													T	T			S									T	T					S	S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	V	L	R	E	S	V	G	K	S	V	V	N	L	I	H	G	V	R	D	M	A	A	I	R	Q	L	K	A	T	H	T	D	S	V	S	S	E	Q	V	D	N	V	R	R	M	L	L	A	M	V	D	D	F	R	C	V	V	I	K	L	A	E	R	I	A	H	L	R	E	V	K	D	A	P	E	D	E	R
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	N	I	E	F	D	F	G	K	D	V	R	D	I	V	D	G	V	T	K	L	G	K	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	S	K	D	I	R	V	I	L	V	K	L	A	D	R	L	H	N	M	R	T	L	K	H	L	R	K	D	K	Q
Template Known Secondary structure																								T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					T	G	G	G	S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.																										.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	A	A	K	E	C	T	N	I	Y	A	P	L	A	N	R	L	G	I	G	Q	L	K	W	E	L	E	D	Y	C	F	R	Y	L	H	P	T	E	Y	K	R	I	A	K	L	L	H	E	R	R	L	D	R	E	H	Y	I	E	E	F	V	G	H	L	R	A	E	M	K	A	E	G	V	K	A	E	V	Y	G
Query Conservation
Alig confidence																																																	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.
Template Sequence		E	R	I	S	R	E	T	M	E	I	Y	A	P	L	A	H	R	L	G	I	S	R	I	K	W	E	L	E	D	L	A	F	R	Y	L	N	E	T	E	F	Y	K	I	S	H	M	M	.	.	.	.	.	.	N	E	K	L	V	D	D	I	V	T	K	I	K	S	Y	T	T	E	Q	G	L	F	G	D	V	Y	G
Template Known Secondary structure											T								T	T																													.	.	.	.	.	.	T																			T
Template Predicted Secondary structure																																																	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.							.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	K	H	I	Y	S	I	W	R	K	M	Q	K	K	N	L	A	F	D	E	L	F	D	V	R	A	V	R	I	V	A	E	R	L	Q	D	C	Y	A	A	L	G	I	V	H	T	H	Y	R	H	L	P	D	E	F	D	D	Y	V	A	N	P	K	P	N	G	Y	Q	S	I	H	T	V	V	L	G	P	G	G
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.
Template Sequence		R	P	K	H	I	Y	S	I	Y	R	K	M	.	.	.	.	.	.	.	.	R	I	F	D	L	I	A	I	R	C	V	M	E	T	Q	S	D	V	Y	A	M	V	G	Y	I	H	E	L	W	R	P	M	P	G	R	F	K	D	Y	I	A	A	P	K	A	N	G	Y	Q	S	I	H	T	T	V	Y	G	P	K	G
Template Known Secondary structure												T	T	.	.	.	.	.	.	.	.													S	S															S		B		T	T					T	T	T	S			T	T												S	S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.									.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	V	E	I	Q	I	R	T	K	Q	M	H	E	D	A	E	L	G	V	A	A	H	W
Query Conservation
Alig confidence		.																					.	.
Template Conservation		.																					.	.
Template Sequence		.	P	I	E	I	Q	I	R	T	K	E	M	H	Q	V	A	E	Y	G	V	A	.	.	W
Template Known Secondary structure		.																		T	T		.	.
Template Predicted Secondary structure		.																					.	.
Template SS confidence
			321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340			.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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