Return to main results Retrieve Phyre Job Id

Job DescriptionP33915
Confidence7.69%DateThu Jan 5 11:52:43 GMT 2012
Rank16Aligned Residues32
% Identity3%Templatec3hd7A_
PDB info PDB header:exocytosisChain: A: PDB Molecule:vesicle-associated membrane protein 2; PDBTitle: helical extension of the neuronal snare complex into the membrane,2 spacegroup c 1 2 1
Resolution3.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.......
Predicted Secondary structure 
Query SS confidence 































Query Sequence  PVNQARWARFRHNRRGYWSLWIFLVLFGLSLC
Query Conservation          

   
 
     

    

 
 
Alig confidence 































Template Conservation   


  
    
  


   
   
  

  
Template Sequence  KLKRKYWWKNLKMMIILGVICAIILIIIIVYF
Template Known Secondary structure  TT
Template Predicted Secondary structure 
Template SS confidence 































   83......90.........100.........110....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions