Job Description P33915 Confidence 99.84% Date Thu Jan 5 11:52:43 GMT 2012 Rank 2 Aligned Residues 192 % Identity 9% Template c2onkC_ PDB info PDB header:membrane protein Chain: C: PDB Molecule:molybdate/tungstate abc transporter, permease PDBTitle: abc transporter modbc in complex with its binding protein2 moda Resolution 3.10 Å

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		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.															.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	R	I	L	Y	G	T	R	I	S	V	L	F	G	L	M	L	T	L	C	S	S	V	M	G	V	L	A	G	A	L	Q	G	Y	Y	G	G	K	V	D	L	W	G	Q	R	F	I	E	V	W	S	G	M	P	T	L	F	L	I	I	L	L	S	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	A	V	W	K	V	V	L	T	T	Y	Y	A	A	L	I	S	T	L	I	A	V	I	F	G	T	P	L	A	Y	I	L	A	R	K	S	F	P	G	K	S	V	V	E	G	I	V	D	L	P	V	V	I	P	H	T	V	A	G	I	A	L	L	V	V	F	G	S	S	G	L	I	G	S	F	S	P	L	K	F
Template Known Secondary structure																																			S				S	S														S														S	T	T	S	T	T	T	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	N	F	W	W	L	L	A	I	T	V	L	F	G	W	M	S	L	V	G	V	V	R	A	E	F	L	R	T	R	N	F	D	Y	I	R	A	A	Q	A	L	G	V	S	D	R	S	I	I	L	R	H	M	L	P	N	A	M	V	A	T	L	T	F	L	P	F	I	L	C	S	S	I	T	T	L	T	S	L
Query Conservation
Alig confidence																													.
Template Conservation																													.
Template Sequence		V	D	A	L	P	G	I	V	V	A	M	L	F	V	S	V	P	I	Y	I	N	Q	A	K	E	G	F	.	A	S	V	D	V	R	L	E	H	V	A	R	T	L	G	S	S	P	L	R	V	F	F	T	V	S	L	P	L	S	V	R	H	I	V	A	G	A	I	M	S	W	A	R	G	I	S	E	F	G	A	V
Template Known Secondary structure		T	T	S																									.			S											T	T										T
Template Predicted Secondary structure																													.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	L	G	F	G	L	P	L	G	S	P	S	L	G	E	L	L	L	Q	G	K	N	N	L	Q	A	P	W	L	G	I	T	A	F	L	S	V	A	I	L	L	S	L	L	I	F	I	G	E	A	V
Query Conservation
Alig confidence						.	.	.	.																					.
Template Conservation						.	.	.	.																					.
Template Sequence		V	V	I	A	.	.	.	.	Y	Y	P	M	I	A	P	T	L	I	Y	E	R	Y	L	S	E	G	L	S	.	A	A	M	P	V	A	A	I	L	I	L	L	S	L	A	V	F	V	A	L	R	I	I
Template Known Secondary structure			T	T		.	.	.	.		S	S																G	G	.	G	T																					T
Template Predicted Secondary structure						.	.	.	.																					.
Template SS confidence
		204	.	.	.					.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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