Job Description P31679 Confidence 99.96% Date Thu Jan 5 11:48:36 GMT 2012 Rank 2 Aligned Residues 414 % Identity 13% Template d1pv7a_ SCOP info MFS general substrate transporter MFS general substrate transporter LacY-like proton/sugar symporter Resolution 3.60

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		F	S	S	I	H	R	R	I	L	L	W	G	S	G	G	P	F	L	D	G	Y	V	L	V	M	I	G	V	A	L	E	Q	.	L	T	P	A	L	K	L	D	A	D	W	I	G	L	L	G	A	G	T	L	A	G	L	F	V	G	T	S	L	F	G	Y	I	S	D	K	V	G	R	R	K	M	F	L	I	D	I
Query Conservation																																		.
Alig confidence																																		.
Template Conservation
Template Sequence		M	Y	Y	L	K	N	T	N	F	W	M	F	G	L	F	F	F	F	Y	F	F	I	M	G	A	Y	F	P	F	F	P	I	W	L	H	D	I	N	H	I	S	K	S	D	T	G	I	I	F	A	A	I	S	L	F	S	L	L	F	Q	P	L	F	G	L	L	S	D	K	L	G	L	R	K	Y	L	L	W	I	I
Template Known Secondary structure							S																																																					T												T	T		T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	I	G	V	I	S	V	A	T	M	F	V	S	S	P	V	E	L	L	V	M	R	V	L	I	G	I	V	I	G	A	D	Y	P	I	A	T	S	M	I	T	E	F	S	S	T	R	Q	R	A	F	S	I	S	F	I	A	A	M	W	Y	V	G	A	T	C	A	D	L	V	G	Y	W	L	Y	D	V	E	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	G	M	L	V	M	F	A	P	F	F	I	F	I	F	G	P	L	L	Q	Y	N	I	L	V	G	S	I	V	G	G	I	Y	L	G	F	C	F	N	A	G	A	P	A	V	E	A	F	I	E	K	V	S	R	R	S	N	F	E	F	G	R	A	R	M	F	G	C	V	G	W	A	L	G	A	S	I	V	G	I
Template Known Secondary structure							T								T							T	T								T	T	T	T	G	G	G	G	G	T	T																	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		G	W	R	W	M	L	G	S	A	A	I	P	C	L	L	I	L	I	G	R	F	E	L	P	E	S	P	R	W	L	L	R	K	G	R	V	K	E	C	E	E	M	M	I	K	L	F	G	E	P	V	A	F	D	E	E	Q	P	Q	Q	T	R	F	R	D	L	F	N	R	R	H	F	P	F	V	L	F	V	A	A
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.
Template Sequence		M	F	T	I	N	N	Q	F	V	F	W	L	G	S	G	C	A	L	I	L	A	V	L	L	F	F	A	K	T	D	A	P	S	S	A	T	V	.	.	.	.	.	.	.	.	.	.	A	N	A	V	G	A	N	H	S	A	F	S	L	K	L	A	L	E	L	F	R	Q	P	K	L	W	F	L	S	L	Y	V	I
Template Known Secondary structure																											S	S				S		S	S	S		S	.	.	.	.	.	.	.	.	.	.	S					S														T	T	S	S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.											.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence		I	W	T	C	Q	V	I	P	M	F	A	I	Y	T	F	G	P	Q	I	V	G	L	L	G	L	G	V	G	K	N	A	A	L	G	N	V	V	I	S	L	F	F	M	L	G	C	I	P	P	M	L	W	L	N	T	A	G	R	R	P	L	L	I	G	S	F	A	M	M	T	L	A	L	A	V	L	G	L	I	P
Query Conservation
Alig confidence																																																																																.	.
Template Conservation																																																																																.	.
Template Sequence		G	V	S	C	T	Y	D	V	F	D	Q	Q	F	A	N	F	F	T	S	F	F	A	T	G	E	Q	G	T	R	V	F	G	Y	V	T	T	M	G	E	L	L	N	A	S	I	M	F	F	A	P	L	I	I	N	R	I	G	G	K	N	A	L	L	L	A	G	T	I	M	S	V	R	I	I	G	S	S	F	.	.
Template Known Secondary structure																			T	T	S	S	S																									T	T																														T	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380		.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		D	M	G	I	W	L	V	V	M	A	F	A	V	Y	A	F	F	S	G	G	P	G	N	L	Q	W	L	Y	P	N	E	L	F	P	T	D	I	R	A	S	A	V	G	V	I	M	S	L	S	R	.	I	G	T	I	V	S	T	W	A	L	P	I	F	I	N	N	Y	G	I	S	N	T	M	L	M	G	A	G	I
Query Conservation																																																				.
Alig confidence																																																				.
Template Conservation
Template Sequence		A	T	S	A	L	E	V	V	I	L	K	T	L	H	M	F	E	V	P	F	L	L	V	G	C	F	K	Y	I	T	S	Q	F	E	V	R	F	S	A	T	I	Y	L	V	C	F	C	F	F	K	Q	L	A	M	I	F	M	S	V	L	A	G	N	M	Y	E	S	I	G	F	Q	G	A	Y	L	V	L	G	L	V
Template Known Secondary structure																																		S		G	G	G										T	T	T
Template Predicted Secondary structure
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	F	G	L	L	I	S	V	A	F	A	P	E	T	R	G	M	S	L	A	Q	T	S	N	M	T	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	G	F	T	L	I	S	V	F	T	L	S	G	P	G	P	L	S	L	L	R	R	Q	V	N	E	V
Template Known Secondary structure													S			S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.