Job Description P31679 Confidence 42.60% Date Thu Jan 5 11:48:36 GMT 2012 Rank 7 Aligned Residues 208 % Identity 10% Template c3hd6A_ PDB info PDB header:membrane protein, transport protein Chain: A: PDB Molecule:ammonium transporter rh type c; PDBTitle: crystal structure of the human rhesus glycoprotein rhcg Resolution 2.10 Å

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		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	Q	P	Q	Q	T	R	F	R	D	L	F	N	R	R	H	F	P	F	V	L	F	V	A	A	I	W	T	C	Q	V	I	P	M	F	A	I	Y	T	F	G	P	Q	I	V	G	L	L	G	L	G	V	G	K	N	A	A	L	G	N	V	V	I	S	L	F	F	M	L	G	C	I	P	P	M	L	W	L	N
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.
Template Sequence		R	R	N	L	E	Q	S	K	E	R	Q	N	S	V	Y	Q	S	D	L	F	A	M	I	G	T	L	F	L	W	M	Y	W	P	S	F	N	S	A	I	S	Y	H	.	.	.	.	.	.	.	.	G	D	S	Q	H	R	A	A	I	N	T	Y	C	S	L	A	A	C	V	L	T	S	V	A	I	S	S	A	L	H
Template Known Secondary structure			T	T	G	G	G	G	T	T	T	S	S																								T	T	T	T		S	S	.	.	.	.	.	.	.	.																													T	S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.									.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.		.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		T	A	G	R	R	P	L	L	I	G	S	F	A	M	M	T	L	A	L	A	V	.	L	G	L	I	P	D	M	G	I	W	L	V	V	M	A	F	A	V	Y	A	F	F	S	G	G	P	G	N	L	Q	W	L	Y	P	N	E	L	F	P	T	D	I	R	A	S	A	V	G	V	I	M	S	L	S	R	I	G	T
Query Conservation																							.
Alig confidence																							.
Template Conservation
Template Sequence		K	K	G	K	L	D	M	V	H	I	Q	N	A	T	L	A	G	G	V	A	V	G	T	A	A	E	M	M	L	M	P	Y	G	A	L	I	I	G	F	V	C	G	I	I	S	T	L	G	F	V	Y	L	T	P	F	L	E	S	R	L	H	I	Q	D	T	C	G	I	N	N	L	H	G	I	P	G	I	I	G	G
Template Known Secondary structure		T	T											G	G	G						T	T	T	T	T	T	T		S																																				T	T						T
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
		384	.	.	.	.	.	390	.	.					.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
Predicted Secondary structure											.	.	.	.
Query SS confidence											.	.	.	.
Query Sequence		I	V	S	T	W	A	L	P	I	.	.	.	.	F	I	N	N	Y	G	I	S	N	T	M	L	M	G	A	G	I	S	L	F	G	L	L	I	S	V	A	F	A	P	E	T	R	G	M	S	L	A	Q	T	S	N	M	T	I	R	G	Q
Query Conservation											.	.	.	.
Alig confidence											.	.	.	.
Template Conservation
Template Sequence		I	V	G	A	V	T	A	A	S	D	W	T	A	R	T	Q	G	K	F	Q	I	Y	G	L	L	V	T	L	A	M	A	L	M	G	G	I	I	V	G	L	I	L	R	L	P	F	W	G	Q	P	S	D	E	N	C	F	E	D	A	V	Y
Template Known Secondary structure																																												T	S	T	T	S					T	T	S	T	T		G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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