 |
Job Description | P32696 | Confidence | 1.53% | Date | Thu Jan 5 11:50:18 GMT 2012 |
Rank | 79 | Aligned Residues | 35 |
% Identity | 17% | Template | c3pjzA_ |
PDB info |
PDB header:transport protein | Chain: A: PDB Molecule:potassium uptake protein trkh; |
PDBTitle: crystal structure of the potassium transporter trkh from vibrio2 parahaemolyticus
|
Resolution | 3.51 Å |
|
  |   |
45 | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | K | L | L | P | W | L | L | L | A | I | A | V | V | W | V | I | K | A | I | K | A | P | K | V | P | K | Y | Q | R | Y | D | R | W | R |
Query Conservation |   |
|
|   |
|
|
|
|   |
|
|   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |
Template Sequence |   |
M | K | V | I | R | I | L | L | L | T | L | Q | G | A | R | E | L | K | R | L | V | H | P | R | A | V | Y | T | I | K | V | G | G | S | A |
Template Known Secondary structure |   |
S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S | S |
|
|
|
|
| S | S | S |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
356 | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|