 |
Job Description | P32696 | Confidence | 4.90% | Date | Thu Jan 5 11:50:18 GMT 2012 |
Rank | 14 | Aligned Residues | 25 |
% Identity | 32% | Template | c2wwbB_ |
PDB info |
PDB header:ribosome | Chain: B: PDB Molecule:protein transport protein sec61 subunit gamma; |
PDBTitle: cryo-em structure of the mammalian sec61 complex bound to the2 actively translating wheat germ 80s ribosome
|
Resolution | 6.48 Å |
|
  |   |
21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | L | G | I | I | A | A | L | V | V | A | T | A | I | M | F | L | G | G | M | L | A | L | M | I | K | L | L |
Query Conservation |   |
|
|
|
|
|
|
|
|   |
|
|   |   |
|
|   |
|   |
|
|   |   |
|   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |
|   |   |   |
|
|   |   |
|
| . | . | . |
|   |
|
|
|   |
|
|
|
|
Template Sequence |   |
F | Q | K | I | A | M | A | T | A | I | G | F | A | I | M | . |
. |
. |
G | F | I | G | F | F | V | K | L | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | S | S |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
33 | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | |
|
|
. | . | 50 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|