Return to main results Retrieve Phyre Job Id

Job DescriptionP32696
Confidence26.58%DateThu Jan 5 11:50:18 GMT 2012
Rank2Aligned Residues25
% Identity24%Templatec2ww9B_
PDB info PDB header:ribosomeChain: B: PDB Molecule:protein transport protein sss1; PDBTitle: cryo-em structure of the active yeast ssh1 complex bound to the2 yeast 80s ribosome
Resolution8.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40........
Predicted Secondary structure 
Query SS confidence 



























Query Sequence  LLGIIAALVVATAIMFLGGMLALMIKLL
Query Conservation 







 

  

 
 

  
 

 
Alig confidence 














...









Template Conservation 
  
  
  


 

...
 


 



Template Sequence  YTKIVKAVGIGFIAV. . . GIIGYAIKLI
Template Known Secondary structure  ...
Template Predicted Secondary structure  ...
Template SS confidence 



























   47..50.........60. ........70.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions