Job Description P33591 Confidence 5.30% Date Thu Jan 5 11:52:16 GMT 2012 Rank 17 Aligned Residues 189 % Identity 11% Template d2nwwa1 SCOP info Proton glutamate symport protein Proton glutamate symport protein Proton glutamate symport protein Resolution 3.20

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		R	Y	V	L	R	R	F	L	L	L	I	P	M	V	L	A	A	S	V	I	I	F	L	M	L	R	L	G	.	T	G	D	P	A	L	D	Y	L	R	L	S	N	L	P	P	T	P	E	M	L	A	S	T	R	T	M	L	G	L	D	Q	P	L	Y	V	Q	Y	G	T	W	L	W	K	A	L	H	L	D	F	G
Query Conservation																														.
Alig confidence																														.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	V	G	V	K	I	V	V	Y	Y	L	L	T	S	A	F	A	V	T	L	G	I	I	M	A	R	L	F	N	P	G	A	G	I	H	L	A	V	G	G	Q	Q	F	Q	P	H	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	P	L	V	H	I	L	L	D	I	V	P	T	N	P	F
Template Known Secondary structure																													S		S																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								G	G	G	S		S
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.																	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.							.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.
Query Sequence		I	S	F	A	S	Q	R	P	V	L	D	D	M	L	N	F	L	P	A	T	L	E	L	A	G	A	A	L	V	L	I	L	L	T	S	V	P	L	G	I	W	A	A	R	H	R	D	.	.	.	.	.	.	R	L	P	D	F	A	V	R	F	I	A	F	L	G	V	S	M	P	N	F	W	L	A	F	L	L	V
Query Conservation																																																	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	A	L	A	N	G	Q	V	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	I	F	F	A	I	I	L	G	I	A	I	T	Y	L	M	N	S	E	N	E	K	V	R	K	S	A	E	T	L	L	D	A	I	N	G	L	A	E	A	M	Y	K	I	V	N	G	V	M	Q	Y	A	P	I
Template Known Secondary structure						S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																T	T		S		T	T																											T	T	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.																	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	F	S	V	Y	L	Q	W	L	P	A	M	G	Y	G	G	W	Q	H	I	I	L	P	A	V	S	I	A	F	M	S	L	A	I	N	A	R	L	L	R	A	S	M	L	D	V	A	G	Q	R	H	V	T	W	A	R	L	R	G	L	N	D	K	Q	T	E	R	R	H	I	L	R	N	A	S	L	P	M	I
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.															.
Template Sequence		G	V	F	A	L	I	A	Y	V	M	A	E	Q	G	V	H	V	V	G	E	L	A	K	V	T	A	A	V	Y	V	G	L	T	L	Q	I	L	L	V	.	.	.	.	.	.	.	.	.	.	.	.	Y	F	V	L	L	K	I	Y	G	I	D	P	I	S	.	F	I	K	H	A	K	D	A	M	L	T	A	F	V
Template Known Secondary structure														T	G	G	G			T																				T	.	.	.	.	.	.	.	.	.	.	.	.							T	T	T						.
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.															.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.													.	.	.	250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.
		236
Predicted Secondary structure
Query SS confidence
Query Sequence		T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		275

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions