Return to main results Retrieve Phyre Job Id

Job DescriptionP33591
Confidence99.68%DateThu Jan 5 11:52:16 GMT 2012
Rank8Aligned Residues221
% Identity9%Templatec2r6gF_
PDB info PDB header:hydrolase/transport proteinChain: F: PDB Molecule:maltose transport system permease protein malf; PDBTitle: the crystal structure of the e. coli maltose transporter
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   72.......80.........90.........100.........110.........120.........130.........140.........150.
Predicted Secondary structure 




















Query SS confidence 















































































Query Sequence  LWKALHLDFGISFASQRPVLDDMLNFLPATLELAGAALVLILLTSVPLGIWAARHRDRLPDFAVRFIAFLGVSMPNFWLA
Query Conservation           
 
   
  
   
   
  

 
      
   

  

              
         

     
Alig confidence 





















































.
























Template Conservation      


 

            
      

  
     
        
     .           
  

  

  
  
Template Sequence  YTVTTGWKNFTRVFTDEGIQKPFLAIFVWTVVFSLITVFLTVAVGMVLACLVQW. EALRGKAVYRVLLILPYAVPSFISI
Template Known Secondary structure  B

B
TTTTTSGGGT
TTTSTTT
.SSSTTTTS
Template Predicted Secondary structure 









.



Template SS confidence 















































































   255....260.........270.........280.........290.........300........ .310.........320.........330...
 
   152.......160. ........170.........180.........190.........200.........210.........220
Predicted Secondary structure 

...........












Query SS confidence 









. . . . . . . . . . .


























































Query Sequence  FLLVMAFSVY. . . . . . . . . . . LQWLPAMGYGGWQHIILPAVSIAFMSLAINARLLRASMLDVAGQRHVTWARLRGLNDKQ
Query Conservation    
   
   ...........                   
 
                       

 

 
 
 
   
Alig confidence 









...........







































.

















Template Conservation             
     
                    

        
       
 
  .
   
 


   


   
Template Sequence  LIFKGLFNQSFGEINMMLSALFGVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKA. IPDDLYEASAMDGAGPFQ
Template Known Secondary structure  T
SSSSTSS



TTTSGGG.S
TT


S
Template Predicted Secondary structure 














.





Template SS confidence 















































































   334.....340.........350.........360.........370.........380.........390.... .....400.........410..
 
   221........230.........240.........250..... ....260.........270.. .......280..
Predicted Secondary structure 

..............
....
Query SS confidence 


































. . . . . . . . . . . . . .
















. . . .









Query Sequence  TERRHILRNASLPMITAVGMHIGELIGGTMIIENI. . . . . . . . . . . . . . FAWPGVGRYAVSAIFNR. . . . DYPVIQCFTL
Query Conservation 
    


   
 
           
   
  
 
..............    


     
    ....
   
    
Alig confidence 


































..............
















....









Template Conservation      
 


  
 
    

 
      
     
  


           
  
    
   
        
 


 
 
Template Sequence  NFFKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNGGPDRLGTTTPAGYTDLLVNYTYRIAFEGGGGQDFGLAAAIAT
Template Known Secondary structure  TTGGGTT

SS
SB
SS
SS

BSS

TSSSS


Template Predicted Secondary structure 





















Template SS confidence 















































































   413......420.........430.........440.........450.........460.........470.........480.........490..
 
   283......290....
Predicted Secondary structure 
Query SS confidence 











Query Sequence  MMVVVFVVCNLI
Query Conservation     
  
   

Alig confidence 











Template Conservation 
   
   
  
Template Sequence  LIFLLVGALAIV
Template Known Secondary structure 
Template Predicted Secondary structure 

Template SS confidence 











   493......500....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions