 |
Job Description | P0AFZ1 | Confidence | 2.29% | Date | Thu Jan 5 11:27:37 GMT 2012 |
Rank | 88 | Aligned Residues | 42 |
% Identity | 14% | Template | c1zbuB_ |
PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:3'-5' exonuclease eri1; |
PDBTitle: crystal structure of full-length 3'-exonuclease
|
Resolution | 3.00 Å |
|
  |   |
152 | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | Q | M | I | D | S | L | T | T | L | F | K | T | I | K | P | V | K | R | A | F | I | C | S | I | K | E | N | E | E | A | Q | P | N | L | L | I | G | I | E | A | D | G | D | I | E | E |
Query Conservation |   |
  |   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|
|
|
|
|   |   |
Template Sequence |   |
D | V | L | K | K | R | L | K | N | Y | Y | K | K | Q | K | L | X | L | . |
. |
. |
. |
. |
K | E | S | N | F | A | D | S | Y | Y | D | Y | I | C | I | I | D | F | E | A | T | C | E | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  | . | . | . | . | . |  |  |
|
|
|
|
|
|
|
| S |  |  |  |  |
|
|
|  |  |
|
|
| T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|