|   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | |
. | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | |
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  | . |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
T | L | L | Q | L | H | F | A | F | N | G | P | F | G | D | A | M | A | E | Q | L | K | P | L | A | E | S | I | N | Q | E | P | G | F | L | W | . |
K | V | W | T | E | S | E | K | N | H | E | A | G | G | I | Y | L | F | T | D | E | K | S | A | L | A | Y | L | E | K | H | T | A | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
  |
|
|
|
|   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|
|
|
|   | . |
|
|
|   |   |   |
|   |
|   |   |
|
|
|
|
|
|
|   |
|   |   |   |
|
|
|
|   |   |   |
|   |
|
| . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |
|
|
|   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
F | V | T | M | N | R | I | P | V | R | P | E | Y | A | E | Q | F | E | E | A | F | R | Q | R | A | R | L | V | D | R | M | P | G | F | I | R | N | L | V | L | R | P | K | N | P | G | D | P | Y | V | V | M | T | L | W | E | S | E | E | A | F | R | A | W | T | E | S | P | A | F | K | E | G | H | A | R | S | G | T | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
| B |
| G | G | G |  |  |  |  |  |  |  |  |  |  |  | G | G | G | G | T | T | S | T | T |  |  |  |  |  |  |  |
|
| S | S | T | T | S |
|  |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  | T | S |  |  |  |  |  |  | T | T | T | T | S | S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
  |   |
73 | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | K | N | L | G | V | E | E | V | V | A | K | V | F | D | V | N |
Query Conservation |   |
|   |   |   |
|   |   |   |
|   |   |
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
Template Sequence |   |
P | K | E | A | F | L | G | P | N | R | L | E | A | F | E | V | V |
Template Known Secondary structure |   |
S |
| S |
| B | S | S |
|
|  |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
  |