Job Description P62617 Confidence 12.25% Date Thu Jan 5 12:07:42 GMT 2012 Rank 49 Aligned Residues 40 % Identity 15% Template c2zkqc_ PDB info PDB header:ribosomal protein/rna Chain: C: PDB Molecule:rna expansion segment es4; PDBTitle: structure of a mammalian ribosomal 40s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

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		93	.	.	.	.	.	.	100	.	.	.	.	.						.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure															.	.	.	.	.
Query SS confidence															.	.	.	.	.
Query Sequence		N	V	D	V	T	I	I	A	Q	A	P	K	M	.	.	.	.	.	L	P	H	I	P	Q	M	R	V	F	I	A	E	D	L	G	C	H	M	D	D	V	N	V	K	A	T
Query Conservation															.	.	.	.	.
Alig confidence															.	.	.	.	.
Template Conservation
Template Sequence		R	T	E	I	I	I	L	A	T	R	T	Q	N	V	L	G	E	K	G	R	R	I	R	E	L	T	A	V	V	Q	K	R	F	G	F	P	E	G	S	V	E	L	Y	A	E
Template Known Secondary structure										S								G	G	G														S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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