 |
Job Description | P0AEJ8 | Confidence | 15.84% | Date | Thu Jan 5 11:23:31 GMT 2012 |
Rank | 10 | Aligned Residues | 56 |
% Identity | 14% | Template | d2gy9q1 |
SCOP info | OB-fold
| Nucleic acid-binding proteins
| Cold shock DNA-binding domain-like
|
Resolution | 15.00 |
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | |
. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | |
. | 50 | . | . | . | . | . | . | . | . | . | 60 |
Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  | . |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
| . |
|
|
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | V | T | G | Q | I | V | C | T | V | R | H | H | G | L | A | H | D | K | L | L | M | V | E | . |
M | I | D | P | Q | G | N | P | D | G | Q | C | A | V | A | I | D | N | I | G | . |
A | G | T | G | E | W | V | L | L | V | S | G |
Query Conservation |   |
|
|
|
|   |
|
|
|
|   |
|   |   |   |
|   |
|   |
|
|
|
|
|
| . |
|
|   |   |   |   |   |   |   |
|   |   |   |
|
|
|
|   |
|
| . |
|
|   |
|
|   |
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |
|
|
|   |
|
|   |
|
|
|   |
|   |
|   |
|   |   |   |
|   |
|
|   |
|   |   |   |   |   |
|
|
|   |
|
|
|   |   |   |   |   |   |   |
|
|   |
|   |
|   |
|   |
Template Sequence |   |
T | L | Q | G | R | V | V | S | D | K | M | E | K | S | I | V | V | A | I | E | R | F | V | K | H | P | I | Y | G | K | F | I | K | R | T | T | K | L | H | V | H | D | E | N | N | E | C | G | I | G | D | V | V | E | I | R | E | C |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
|
| S | S | S |  |  |  |  |  |  |  |  |  |  |  |
| S | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|
|
|
| T | T |
|  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . |
  |
Send structure to FirstGlance for more viewing options
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|