Job Description P0AEJ8 Confidence 5.91% Date Thu Jan 5 11:23:31 GMT 2012 Rank 35 Aligned Residues 54 % Identity 13% Template c1s1hQ_ PDB info PDB header:ribosome Chain: Q: PDB Molecule:40s ribosomal protein s11; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1h,4 contains 40s subunit. the 60s ribosomal subunit is in file5 1s1i. Resolution 11.70 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.		.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.																	.					.
Query SS confidence																									.																	.					.
Query Sequence		V	T	G	Q	I	V	C	T	V	R	H	H	G	L	A	H	D	K	L	L	M	V	E	.	M	I	D	P	Q	G	N	P	D	G	Q	C	A	V	A	I	.	D	N	I	G	.	A	G	T	G	E	W	V	L	L	V	S
Query Conservation																									.																	.					.
Alig confidence																									.																	.					.
Template Conservation
Template Sequence		L	T	G	T	V	V	S	T	K	M	H	R	T	I	V	I	R	R	A	Y	L	H	Y	I	P	K	Y	N	R	Y	E	K	R	H	K	N	V	P	V	H	V	S	P	A	F	R	V	Q	V	G	D	I	V	T	V	G	Q
Template Known Secondary structure											S	S	S													T	T	T															S	S	S	S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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