Return to main results Retrieve Phyre Job Id

Job DescriptionP0AG14
Confidence99.91%DateThu Jan 5 11:27:48 GMT 2012
Rank12Aligned Residues147
% Identity17%Templated2f6ia1
SCOP infoClpP/crotonase ClpP/crotonase Clp protease, ClpP subunit
Resolution2.45

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   105....110.........120.........130.. .......140.........150.........160.........170.........180..
Predicted Secondary structure 




..














Query SS confidence 



























. .

















































Query Sequence  VLDFKGSMDAHEVNSLREEITAVLAAFK. . PQDQVVLRLESPGGMVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYM
Query Conservation 

   
 
           
   
  
 ..    


 





 
  
  
   
 


  





 
   





 
Alig confidence 








....














..

























...




















Template Conservation 

 
 
 
 ....   
  
   
  
     
 
 
 





 
     
   
...      
   
 
 


    
Template Sequence  IIYLTDEIN. . . . KKTADELISQLLYLDNINHNDIKIYINSPGGSINEGLAILDIF. . . NYIKSDIQTISFGLVASMASV
Template Known Secondary structure 
S
B
....

S


B
...SSS

Template Predicted Secondary structure 




....










...







Template SS confidence 















































































   196...200.... .....210.........220.........230.........240....... ..250.........260........
 
   183......190 .........200.........210.........220.........230.........240.........250.........260
Predicted Secondary structure 


..

























Query SS confidence 







. .





































































Query Sequence  MACVADKI. . VSAPFAIVGSIGVVAQMPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKD
Query Conservation 

  



.. 
 
 








        

 
 

    
 

  
    
    


 
   
  

  
  
  
Alig confidence 







..





















......................................









Template Conservation 
  

 

 
   
 
    
           ......................................
         
Template Sequence  ILASGKKGKRKSLPNCRIMIHQPLGNAFQTKE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ILYLKKLLYH
Template Known Secondary structure  TS
TT

TT
SS
TT
S


......................................
Template Predicted Secondary structure 











......................................
Template SS confidence 















































































   269270.........280.........290.........300 .........310
 
   261..... ...270...... ...280.........290......
Predicted Secondary structure 

..

.













Query SS confidence 





. .









.



















Query Sequence  FVKRMR. . PSLDIEQVAT. GEHWYGQQAVEKGLVDEINT
Query Conservation   

  
..       

 .
 
 

  

  







Alig confidence 





..









.



















Template Conservation    
   
     
          

 

   



 

 
Template Sequence  YLSSFTNQTVETIEKDSDRDYYMNALEAKQYGIIDEVIE
Template Known Secondary structure 


TT

TS
S

Template Predicted Secondary structure 













Template SS confidence 






































   319320.........330.........340.........350.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions