 |
Job Description | P0AG14 | Confidence | 74.42% | Date | Thu Jan 5 11:27:48 GMT 2012 |
Rank | 127 | Aligned Residues | 73 |
% Identity | 18% | Template | d1vc1a_ |
SCOP info | SpoIIaa-like
| SpoIIaa-like
| Anti-sigma factor antagonist SpoIIaa
|
Resolution | 2.00 |
|
 |
  |   |
98 | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | |
. | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | S | K | P | R | V | W | V | L | D | F | K | G | S | M | D | A | H | E | V | N | S | L | R | E | E | I | T | A | V | L | A | A | F | K | P | Q | D | Q | V | V | L | R | L | E | S | P | G | G | M | . |
V | H | G | Y | G | L | A | A | S | Q | L | Q | R | L | R | D | K | N | I | P | L | T | V | T |
Query Conservation |   |
  |   |   |   |   |   |   |
|
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |
|
|
|   |
|
|
|
|
|
|   | . |
|   |   |
|   |   |
|   |   |   |
|   |
|
|
|   |   |
|
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   | . |   |   |   |   |   |
|
|
|
|
|
|   |
|   |   |
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
V | E | Q | D | D | K | A | I | V | R | V | Q | G | D | I | D | A | Y | N | S | S | E | L | K | E | Q | L | R | N | F | I | S | T | . |
T | S | K | K | K | I | V | L | D | L | S | S | V | S | Y | M | D | S | A | G | L | G | T | L | V | V | I | L | K | D | A | K | I | N | G | K | E | F | I | L | S |
Template Known Secondary structure |   |
 |  |  | T | T |  |  |  |  |  |  |  | S |
| B | S | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
| S |  |  |  |  |  |  |  |  |
|
|
| B |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|