Job Description P0AG14 Confidence 98.24% Date Thu Jan 5 11:27:48 GMT 2012 Rank 89 Aligned Residues 162 % Identity 18% Template c3m6nA_ PDB info PDB header:lyase Chain: A: PDB Molecule:rpff protein; PDBTitle: crystal structure of rpff Resolution 1.80 Å

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		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.								.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	D	S	K	P	R	V	W	V	L	D	F	K	G	S	M	D	A	H	E	V	N	S	L	R	E	E	I	T	A	V	L	A	A	F	K	P	Q	D	Q	.	.	.	.	.	.	.	V	V	L	R	L	E	S	P	G	G	M	V	H	G	Y	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																										.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	E	P	Q	R	D	V	Y	W	I	H	M	H	A	D	L	R	A	C	F	S	T	R	L	V	D	D	I	T	G	Y	Q	T	N	L	G	Q	R	L	N	T	A	G	V	L	A	P	H	V	V	L	A	S	D	S	D	V	F	N	L	G	G	D	L	A	L	F	C	Q	L	I	R	E	G	D	R	A	R	L	L
Template Known Secondary structure				T	T	T	T								T	T				S	B																							T		S	S								S	S	S	S	S	B			B												T
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
										154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.					.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																																																	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																																																	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	A	A	S	Q	L	Q	R	L	R	D	K	N	I	P	L	T	V	T	V	D	K	V	A	A	S	G	G	Y	M	M	A	C	V	A	D	K	I	V	S	A	P	F	A	I	V	G	S	I	.	.	.	.	G	V	V	A	Q	M	P	N	F	N	R	F	L	K	S	K	D	I	D	I
Query Conservation		.	.	.	.	.	.	.	.																																																	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																																	.	.	.	.																				.
Template Conservation																																																																																	.
Template Sequence		D	Y	A	Q	R	C	V	R	G	V	H	A	F	H	V	G	L	G	A	R	A	H	S	I	A	L	V	Q	G	N	A	L	G	G	G	F	E	A	A	L	S	C	H	T	I	I	A	E	E	G	V	M	M	G	L	P	E	V	L	F	D	L	F	P	G	M	G	A	Y	S	F	M	C	Q	R	I	S	A	H	.
Template Known Secondary structure																T	G	G	G	T	T									S				T									S	S						T	T						G	G	G	G	G	T					S	S						T	T	T	S				.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	H	T	A	G	Q	Y	K	R	T	L	T	L	L	G	E	N	T	E	E	G	R	E	K	F	R	E	E	L	N	E	T	H	Q	L	F	K	D	F	V	K	R	M	R	P	S	L	D	I	E	Q	V	A	T	G	E	H	W	Y	G	Q	Q	A	V	E	K	G	L	V	D	E	I	N	T	S	D	E	V	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	Q	K	I	M	L	E	G	N	L	Y	S	A	E	Q	L	L	G	M	G	L	V	D	R	V	V	P	R	G	Q	G	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					T	S		S					T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																	184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		302	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	L	M	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	V	E	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions