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Job DescriptionP0AG14
Confidence98.75%DateThu Jan 5 11:27:48 GMT 2012
Rank44Aligned Residues166
% Identity20%Templatec3h02F_
PDB info PDB header:lyaseChain: F: PDB Molecule:naphthoate synthase; PDBTitle: 2.15 angstrom resolution crystal structure of naphthoate synthase from2 salmonella typhimurium.
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  VATDSKPRVWVLDFKGSMD. AHEVNSLREEITAVLAAFKPQDQV. VLRLESPGGMVHGY. . . . GLAASQLQRLRDKNIPL
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Template Sequence  RYEKSTDGIAKITINRPQVRNAFRPLTVKEXIQALADARYDDNVGVIILTGEGDKAFCAGGDHLNVLDFQRQIRTCPKPV
Template Known Secondary structure  TTS

GGGTT
B

TT

SSSS

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   26...30.........40.........50.........60.........70.........80.........90.........100.....
 
   169170.........180.........190......... 200.........210.........220.........230.........240....
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Query Sequence  TVTVDKVAASGGYMMACVADKIVSAPFAIVG. . . . SIGVVAQMPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGR
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Template Sequence  VAXVAGYSIGGGHVLHXXCDLTIAAENAIFGQTGPKVGSFDGGWGASYXARIVGQKKAR. . . . . . . . . . . . . . . . . . . . .
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   123......130.........140.........150.........160.........170.........180.
 
   245....250.........260.........270.........280.........290.........300........
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Query Sequence  EKFREELNETHQLFKDFVKRMRPSLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSLMEGR
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . EIWFLCRQYDAQQALDXGLVNTVVPLADLEKETVRWC
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TTSSS
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   182.......190.........200.........210........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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