 |
Job Description | P0AG14 | Confidence | 97.21% | Date | Thu Jan 5 11:27:48 GMT 2012 |
Rank | 101 | Aligned Residues | 105 |
% Identity | 20% | Template | c3glmD_ |
PDB info |
PDB header:lyase | Chain: D: PDB Molecule:glutaconyl-coa decarboxylase subunit a; |
PDBTitle: glutaconyl-coa decarboxylase a subunit from clostridium2 symbiosum co-crystallized with crotonyl-coa
|
Resolution | 2.50 Å |
|
 |
  |   |
98 | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | |
. | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 160 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | S | K | P | R | V | W | V | L | D | F | K | G | S | M | D | A | H | E | V | N | S | L | R | E | E | I | T | A | V | L | A | A | F | K | P | Q | D | . |
Q | V | V | L | R | L | E | S | P | G | G | M | V | H | G | Y | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | A | A | S | Q | L | Q | R | L | R | D | K | N | I |
Query Conservation |   |
  |   |   |   |   |   |   |
|
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   | . |   |
|
|
|   |
|
|
|
|
|
|   |
|   |   |
|   | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |
|   |
|
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|   |
|   |
|   |
|   |
|
|   |
|
|
|   |
|   |   |   |   |   |
|   |   |
|   |   |
|   |
|   |   |   |   |
|
|   |
|   |
|   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|
Template Sequence |   |
D | G | K | W | V | Y | I | V | A | S | D | N | K | K | M | A | G | A | W | V | P | G | Q | A | E | N | L | I | R | C | S | D | A | A | K | M | M | H | L | P | L | I | Y | L | L | N | C | S | G | V | E | F | P | N | Q | D | K | V | Y | P | N | R | R | G | G | G | T | P | F | F | R | N | S | E | L | N | Q | L | G | I |
Template Known Secondary structure |   |
T | T |  |  |  |  |  |  |  |  |
| T | T | T | G | G | G |
| B |
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |
|
|
|
| B |
| G | G | G |  |  |  |  | S | S | S | T | T | S | T | T |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
104 | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . |
  |
  |   |
167 | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | L | T | V | T | V | D | K | V | A | A | S | G | G | Y | M | M | A | C | V | A | D | K | I | V | S | A | P | F | A | I | V | G | S | I | G |
Query Conservation |   |
|
|
|
|   |
|   |   |   |
|
|
|
|
|
|   |
|
|   |   |
|
|
|
|   |
|   |
|   |
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|   |
|   |   |   |
|
|
|
|
|   |   |   |   |   |
|   |
|
|   |   |   |   |
|   |
|   |
|   |
|
Template Sequence |   |
P | V | I | V | G | I | Y | G | T | N | P | A | G | G | G | Y | H | S | I | S | P | T | I | L | I | A | H | Q | D | A | N | M | A | V | G | G |
Template Known Secondary structure |   |
|  |  |  |  |  |
| S |  |  |  | T |  |  |  |  |  |  |  | S | S | S |  |  |  |  |  | T | T |
|  |  |  | S | S |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
184 | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|