Return to main results Retrieve Phyre Job Id

Job DescriptionP0AG14
Confidence41.79%DateThu Jan 5 11:27:48 GMT 2012
Rank155Aligned Residues173
% Identity18%Templatec3bo9B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:putative nitroalkan dioxygenase; PDBTitle: crystal structure of putative nitroalkan dioxygenase (tm0800) from2 thermotoga maritima at 2.71 a resolution
Resolution2.71 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   124.....130.........140.........150.........160.... .....170... ......180.........190.........200.
Predicted Secondary structure 











.



.







Query SS confidence 








































.








.



























Query Sequence  ITAVLAAFKPQDQVVLRLESPGGMVHGYGLAASQLQRLRDK. NIPLTVTVD. KVAASGGYMMACVADKIVSAPFAIVGSI
Query Conservation 
   
  
     


 





 
  
  
   
 


  .





 
 .  





 

  



 
 
 





Alig confidence 








































.








.
















......




Template Conservation     
  
   


 

  
 




        

  
     








      
 





 

......  

 
Template Sequence  DSLARXVERAGADAVIAEGXESGGHIGEVTTFVLVNKVSRSVNIPVIAAGGIADGRGXAAAFALGAEAV. . . . . . QXGTR
Template Known Secondary structure  TT
S

TTSS

SS

SS
SS

ST
S......S
Template Predicted Secondary structure 




























......
Template SS confidence 















































































   122.......130.........140.........150.........160.........170.........180.........190 .....
 
   202... ....210.........220.........230......... 240.........250.........260.........270......
Predicted Secondary structure  ....




















.




Query SS confidence 



. . . .

































.




































Query Sequence  GVVA. . . . QMPNFNRFLKSKDIDIELHTAGQYKRTLTLLGEN. TEEGREKFREELNETHQLFKDFVKRMRPSLDIEQVAT
Query Conservation 


 ....       

 
 

    
 

  
    
    .


 
   
  

  
  
   

  
       

 
Alig confidence 



....




















...









.




































Template Conservation 

 
 

      
  
       

   ...   
   
 
                                 
    
Template Sequence  FVASVESDVHPVYKEKIVKASIRDTVVTG. . . AKLGHPARVLRTPFARKIQEXEFENPXQAEEXLVGSLRRAVVEGDLER
Template Known Secondary structure  TBSS

S


TT

...TTTT




TT

TTT
Template Predicted Secondary structure 











...


















Template SS confidence 















































































   196...200.........210.........220.... .....230.........240.........250.........260.........270..
 
   277..280.........290.........300........
Predicted Secondary structure 















Query SS confidence 































Query Sequence  GEHWYGQQAVEKGLVDEINTSDEVILSLMEGR
Query Conservation 
 
 

  

  







 



       
Alig confidence 






...





















Template Conservation      

 ...    
  
  
 


  
  
 
Template Sequence  GSFXVGQ. . . SAGLIDEIKPVKQIIEDILKEF
Template Known Secondary structure 


B

G...GGGG

S
B
Template Predicted Secondary structure 

...



Template SS confidence 































   273...... 280.........290.........300.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions