Job Description P0AG14 Confidence 38.38% Date Thu Jan 5 11:27:48 GMT 2012 Rank 168 Aligned Residues 107 % Identity 20% Template c1fc9A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:photosystem ii d1 protease; PDBTitle: photosystem ii d1 c-terminal processing protease Resolution 1.90 Å

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		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	K	P	R	V	W	V	L	D	F	K	G	S	M	D	A	H	E	V	N	S	L	R	E	E	I	T	A	V	L	A	A	F	K	P	Q	D	Q	V	V	L	R	L	E	S	.	P	G	G	M	V	H	G	Y	G	L	A	A	S	Q	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																															.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.																			.	.													.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.																			.	.
Template Sequence		A	K	Q	Q	L	G	Y	V	R	L	A	T	.	F	N	S	N	T	T	A	A	A	Q	Q	A	F	T	E	L	S	K	.	.	Q	G	V	A	G	L	V	L	D	I	R	N	N	G	G	G	L	F	P	A	G	V	N	V	A	R	M	L	V	D	R	G	D	L	V	L	I	A	D	S	Q	G	I	R	D	I	Y
Template Known Secondary structure		S	S	S										.		S	T	T															.	.	T	T		S							T	T																			S	S								S	S	S
Template Predicted Secondary structure														.																			.	.
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.		.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.			.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
							160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.						.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																														.	.	.	.	.
Query SS confidence		.	.	.	.	.																														.	.	.	.	.
Query Sequence		.	.	.	.	.	R	L	R	D	K	N	I	P	L	T	V	T	V	D	K	V	A	A	S	G	G	Y	M	M	A	C	V	A	D	.	.	.	.	.	K	I	V	S	A	P	F	A	I	V	G	S	I	G	V	V	A	Q	M	P	N
Query Conservation		.	.	.	.	.																														.	.	.	.	.
Alig confidence		.	.	.	.	.							.																							.	.	.	.	.
Template Conservation													.
Template Sequence		S	A	D	G	N	S	I	D	S	A	T	.	P	L	V	V	L	V	N	R	G	T	A	S	A	S	E	V	L	A	G	A	L	K	D	S	K	R	G	L	I	A	G	E	R	T	F	G	K	G	L	I	Q	T	V	V	D	L	S	D
Template Known Secondary structure					S			S		S	S	S	.								T	T			T												T	T	S						S															T	T
Template Predicted Secondary structure													.
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360		.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions