 |
Job Description | P0AA31 | Confidence | 10.44% | Date | Thu Jan 5 11:11:47 GMT 2012 |
Rank | 88 | Aligned Residues | 60 |
% Identity | 20% | Template | c3ndjA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:methyltransferase; |
PDBTitle: x-ray structure of a c-3'-methyltransferase in complex with s-2 adenosyl-l-homocysteine and sugar product
|
Resolution | 1.50 Å |
|
 |
  |   |
18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | |
|
|
. | . | . | 70 | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  | . | . | . |  |
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | Y | P | A | V | A | T | L | E | A | M | P | Q | L | K | K | G | E | I | L | E | V | V | S | D | C | P | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | I | N | N | I | P | L | D | A | R | N | H | G | Y | T | V | L | D | I | Q | Q | . |
. |
. |
D | G | P | T | I | R | Y | L | I |
Query Conservation |   |
|   |
|   |
|   |   |   |   |   |
|   |   |
|   |   |
|   |   |
|   |
|   |   |
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|
|   |   |
|
|   |   |
|
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |
Template Sequence |   |
P | Y | V | Q | S | V | L | E | G | V | D | A | L | L | A | P | D | G | V | F | V | F | E | D | P | Y | L | G | D | I | V | A | K | T | S | F | D | Q | I | Y | D | E | H | F | F | L | F | S | A | T | S | V | Q | G | M | A | Q | R | C | G | F | E | L | V | D | V | Q | R | L | P | V | H | G | G | E | V | R | Y | T | L |
Template Known Secondary structure |   |
S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  | T |
| G | G | G |
| S | T | T |
|
|  |  |
|
|  |  |  |  |  |  |  |  |  | T | T | T |  |  |  |  |  |  |  |  |  |
| G | G | G | S |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
183 | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . |
  |
  |   |
76 | . |
Predicted Secondary structure |   |
 |
|
Query SS confidence |   |
|
|
Query Sequence |   |
Q | K |
Query Conservation |   |
  |
|
Alig confidence |   |
|
|
Template Conservation |   |
  |   |
Template Sequence |   |
A | R |
Template Known Secondary structure |   |
 |  |
Template Predicted Secondary structure |   |
 |  |
Template SS confidence |   |
|
|
  |   |
263 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|