Return to main results Retrieve Phyre Job Id

Job DescriptionP30177
Confidence39.53%DateThu Jan 5 11:46:14 GMT 2012
Rank47Aligned Residues81
% Identity16%Templatec2pqdA_
PDB info PDB header:transferaseChain: A: PDB Molecule:3-phosphoshikimate 1-carboxyvinyltransferase; PDBTitle: a100g cp4 epsps liganded with (r)-difluoromethyl tetrahedral reaction2 intermediate analog
Resolution1.77 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   57..60.........70.........80.........90....... ..100 .........110.........120... ...
Predicted Secondary structure 
























........










..

Query SS confidence 








































. . . . . .


. .






















. .


Query Sequence  AEMLGFYEAMQNHTIKLTPPAGKPMPIVIPSYNGARKQANL. . . . . . TPL. . LAILLHKLGFPVVVHGVSEDPTR. . VLT
Query Conservation   

 
   
                
     


   
 

......
  ..

 
 
  
  
 


 
    
.. 

Alig confidence 








































......


..






















..


Template Conservation   

      
  

  
        
              
  
 


  
 
  

          
   
  


  
Template Sequence  EDVINTGKAMQAMGARIRKEGDTWIIDGVGNGGLLAPEAPLDFGNAGTGCRLTMGLVGVYDFDSTFIGDASLTKRPMGRV
Template Known Secondary structure  TT
TT
TT




SS

TT
TSSS

TTGGGS

Template Predicted Secondary structure 































Template SS confidence 















































































   54.....60.........70.........80.........90.........100.........110.........120.........130...
 
   127..130.......
Predicted Secondary structure 




Query SS confidence 










Query Sequence  ETIFELMGITP
Query Conservation 




 


  
Alig confidence 










Template Conservation     
  


  
Template Sequence  LNPLREMGVQV
Template Known Secondary structure  TT
Template Predicted Secondary structure 


Template SS confidence 










   134.....140....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions