Job Description P30177 Confidence 45.23% Date Thu Jan 5 11:46:14 GMT 2012 Rank 41 Aligned Residues 193 % Identity 17% Template c2cnwF_ PDB info PDB header:signal recognition Chain: F: PDB Molecule:cell division protein ftsy; PDBTitle: gdpalf4 complex of the srp gtpases ffh and ftsy Resolution 2.39 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	L	Y	A	H	M	L	N	G	E	V	P	D	L	E	L	G	G	V	L	I	A	L	R	I	K	G	E	G	E	A	E	M	L	G	F	Y	E	A	M	Q	N	H	T	I	K	L	T	P	P	A	G	K	P	M	P	I	V	I	P	S	Y	N	G	A	R	K	Q	A	N	L	T	P	L	L	A	I	L	L
Query Conservation
Alig confidence																																					.																																		.	.	.
Template Conservation																																					.																																		.	.	.
Template Sequence		E	E	L	E	M	A	L	L	A	A	D	V	G	L	S	A	T	E	E	I	L	Q	E	V	R	A	S	G	R	K	D	L	K	E	A	.	V	K	E	K	L	V	G	M	L	E	P	P	V	E	P	K	G	R	V	V	L	V	V	G	V	N	G	V	G	K	T	T	T	.	.	.	I	A	K	L	G	R	Y	Y
Template Known Secondary structure										T	T	T																			S		S				.									T							S	S	S							S	T	T	S	S					.	.	.
Template Predicted Secondary structure																																					.																																		.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130					.	.	.	.	.	.	.						.	.	140	.	.	.	.	.	.							.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																											.	.	.	.								.	.	.	.	.										.	.	.	.	.	.
Query SS confidence																											.	.	.	.								.	.	.	.	.										.	.	.	.	.	.
Query Sequence		H	K	L	G	F	P	V	V	V	H	G	V	S	E	D	P	T	R	V	L	T	E	T	I	F	.	.	.	.	E	L	M	G	I	T	P	.	.	.	.	.	T	L	H	G	G	Q	A	Q	A	.	.	.	.	.	.	K	L	D	E	H	Q	P	V	F	M	P	V	G	A	F	C	P	P	L	E	K	Q	L	A
Query Conservation																											.	.	.	.								.	.	.	.	.										.	.	.	.	.	.
Alig confidence															.	.											.	.	.	.								.	.	.	.	.										.	.	.	.	.	.
Template Conservation															.	.
Template Sequence		Q	N	L	G	K	K	V	M	F	C	A	G	D	.	.	T	F	R	A	A	G	G	T	Q	L	S	E	W	G	K	R	L	S	I	P	V	I	Q	G	P	E	G	T	D	P	A	A	L	A	Y	D	A	V	Q	A	M	K	A	R	G	Y	D	L	L	F	V	D	T	A	G	R	L	H	T	K	H	N	L	M	E
Template Known Secondary structure			T	T	T										.	.		S	S	T	T													T								T	T	S																T	T		S											T	T
Template Predicted Secondary structure															.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		M	R	W	R	M	G	V	R	N	S	A	H	T	L	A	K	L	A	T	P	F	A	E	G	E	A	L	R	L	S	S	.	V	S	H	P	E	Y	I	G	R	V	A	K	F	F	S	D	I	G	G	R	A	L	L	M	H	G	T	E	G
Query Conservation																																	.
Alig confidence							.	.	.	.	.	.																					.
Template Conservation							.	.	.	.	.	.
Template Sequence		E	L	K	K	V	.	.	.	.	.	.	K	R	A	I	A	K	A	D	P	E	E	P	K	E	V	W	L	V	L	D	A	V	T	G	Q	N	G	L	E	Q	A	K	K	F	H	E	A	V	G	L	T	G	V	I	V	T	K	L	D	G
Template Known Secondary structure							.	.	.	.	.	.									T	T											T	T			T																S							T	T	S
Template Predicted Secondary structure							.	.	.	.	.	.
Template SS confidence
		205	.	.	.	.							210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions