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Job DescriptionP30177
Confidence100.00%DateThu Jan 5 11:46:14 GMT 2012
Rank7Aligned Residues292
% Identity16%Templatec1brwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:protein (pyrimidine nucleoside phosphorylase); PDBTitle: the crystal structure of pyrimidine nucleoside2 phosphorylase in a closed conformation
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MDYRKIIKEIGRGKNHARDLDRDTARGLYAHMLNGEVPDLELGGVLIALRIKGEGEAEMLGFYEAMQNHTIKLTPPAGK.
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Template Sequence  MRMVDLIAKKRDG. . . . KALTKEEIEWIVRGYTNGDIPDYQMSALAMAIYFRGMTEEETAALTMAMVQSGEMLDLSSIRG
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   1001........1010... ......1020.........1030.........1040.........1050.........1060.........1070......
 
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Query Sequence  . PMPIVIPSYNGARKQANLTPLLAILLHKLGFPVVVHGVSEDPTRVLTETIFELM. GITPTLHGGQAQAKLDEHQPVFM.
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Template Sequence  VKVDKHSTGGVG. . . . DTTTLVLGPLVASVGVPVAKMSGRGLGHTGGTIDKLESVPGFHVEISKDEFIRLVNENGIAIIG
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   1077..1080........ .1090.........1100.........1110.........1120.........1130.........1140.........1150..
 
   157..160.........170.........180...... ...190.........200.........210.........220.........230....
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Query Sequence  PVGAFCPPLEKQLAMRWRMGVRNSAHTLAK. . LATPFAEGEALRLSSVSHPEYIGRVAKFFSDIGGRALLMHGTEGEVYA
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Template Sequence  QTGDLTPADKKLYALRDVTATVNSIPLIASSIMSKKIAAGADAIVLDVKTG. . . . . . . . . . . . . . . AGAFMKKLDEARRL
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   1153......1160.........1170.........1180.........1190.........1200... ......1210.......
 
   235....240.........250.........260.........270.........280....... ..290.........300.........310..
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Query Sequence  NPQRCPQINLIDREGMRVLYEKQDTAGSELLPQAKDPETTAQWIERCLAGSEP. . IPESLKIQMACCLVATGEAATISDG
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Template Sequence  ARVMVDIG. . KRVGRRTMAVISDMSQPLG. . . YAVGNALEVKEAIETLKGNGPHDLTELCLTLGSHMVYLAEKAPSLDEA
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   1218.1220..... ....1230.........1240.... .....1250.........1260.........1270.........1280.........1290..
 
   313......320
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Query Sequence  LARVNQAF
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Template Sequence  RRLLEEAI
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   1293......1300
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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