 |
Job Description | P0A6F9 | Confidence | 41.64% | Date | Thu Jan 5 11:03:04 GMT 2012 |
Rank | 44 | Aligned Residues | 46 |
% Identity | 33% | Template | c2cdaA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:glucose dehydrogenase; |
PDBTitle: sulfolobus solfataricus glucose dehydrogenase 1 in complex2 with nadp
|
Resolution | 2.28 Å |
|
 |
  |   |
37 | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | G | E | V | L | A | V | G | N | G | R | I | L | E | N | G | E | V | K | P | L | D | V | K | V | G | D | I | V | I | F | N | D | G | Y | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | K | S | E | K | I | D | N | E | E | V | L | I | M | S | E | S | D | I | L |
Query Conservation |   |
  |
|   |
|
|
|
|
|   |
|   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |
|
|   |
|
|   |   |   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
I | G | V | V | E | E | S | Y | H | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
F | S | Q | G | D | L | V | M | P | V | N | R | R | G | C | G | I | C | R | N | C | L | V | G | R | P | D | F | C | E | T | G | E | F | G | E | A | G | I | H | K | M | D | G | F | M | R | E | W | W | Y | D | D | P | K | Y | L | V |
Template Known Secondary structure |   |
 |  |  |  | S | S |
|
| S | S | . | . | . | . | . | . | . | . | . | . | . | . |
|
| T | T |
|  |  |  |  |
| S |  |  |
|
| S | S | S |  |  |  |  | T | T |
| G | G | G |
| S | S | S |
|
|  |  |  | T | T | B |  |  |
|
| S |
| B | S |  |  |  |  |
| G | G | G |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
69 | 70 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . |
  |
  |   |
93 | . |
Predicted Secondary structure |   |
 |  |
Query SS confidence |   |
|
|
Query Sequence |   |
A | I |
Query Conservation |   |
|
|
Alig confidence |   |
|
|
Template Conservation |   |
  |
|
Template Sequence |   |
K | I |
Template Known Secondary structure |   |
 |  |
Template Predicted Secondary structure |   |
 |
|
Template SS confidence |   |
|
|
  |   |
137 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|