Job Description P0A6F9 Confidence 12.60% Date Thu Jan 5 11:03:04 GMT 2012 Rank 81 Aligned Residues 44 % Identity 30% Template c1dgsB_ PDB info PDB header:ligase Chain: B: PDB Molecule:dna ligase; PDBTitle: crystal structure of nad+-dependent dna ligase from t.2 filiformis Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.																						.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																			.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	G	S	A	A	A	K	S	T	R	G	E	V	L	A	V	G	.	N	G	R	I	L	E	N	G	E	V	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	V	K	V	G	D	I	V	I	F	N	D	G	Y	G
Query Conservation																			.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation																																																																		.
Template Sequence		P	A	E	E	K	E	T	R	L	L	D	V	V	F	Q	V	G	R	T	G	R	V	T	P	V	G	V	L	E	P	V	F	I	E	G	S	E	V	S	R	V	T	L	H	N	E	S	Y	I	E	E	L	D	I	R	I	G	D	W	V	L	V	H	K	.	A	G
Template Known Secondary structure																			T	T		B												S	S	S	S									S							T	T		B	S	S								.		T
Template Predicted Secondary structure																																																																		.
Template SS confidence
		2314	.	.	.	.	.	2320	.	.	.	.	.	.	.	.	.	2330	.	.	.	.	.	.	.	.	.	2340	.	.	.	.	.	.	.	.	.	2350	.	.	.	.	.	.	.	.	.	2360	.	.	.	.	.	.	.	.	.	2370	.	.	.	.	.	.	.		.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions