Return to main results Retrieve Phyre Job Id

Job DescriptionQ46793
Confidence15.49%DateThu Jan 5 12:34:14 GMT 2012
Rank21Aligned Residues35
% Identity23%Templated1mr1c_
SCOP infoSAND domain-like SAND domain-like SMAD4-binding domain of oncoprotein Ski
Resolution2.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   168.170.........180.........190....... ..200..
Predicted Secondary structure 










.
Query SS confidence 





























.




Query Sequence  FFTDQFIAEFSPQEFVDNCEQYLINNHCFS. PDKVN
Query Conservation     









 

      
       .

   
Alig confidence 





























.




Template Conservation 
 
  
   


 


 



  
  









Template Sequence  IQCLDCRLMYPPHKFVVHSHKALENRTCHWGFDSAN
Template Known Secondary structure  TTT


TT


S


SS



S

GGG
Template Predicted Secondary structure 

















Template SS confidence 



































   245....250.........260.........270.........280
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions