Job Description Q46793 Confidence 8.93% Date Thu Jan 5 12:34:14 GMT 2012 Rank 60 Aligned Residues 35 % Identity 26% Template c3ikmD_ PDB info PDB header:transferase Chain: D: PDB Molecule:dna polymerase subunit gamma-1; PDBTitle: crystal structure of human mitochondrial dna polymerase2 holoenzyme Resolution 3.24 Å

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		145	.	.	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.																															.	.	.	.	.	.	.
Predicted Secondary structure										.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	S	Y	F	V	D	K	S	.	.	I	W	N	V	H	I	T	F	H	D	D	K	R	F	V	F	F	T	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	I	A	E	F	S	P
Query Conservation										.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	K	W	L	F	E	E	F	A	I	D	G	R	F	C	I	S	I	H	D	E	V	R	Y	L	V	R	E	E	D	R	Y	R	A	A	L	A	L	Q	I	T	N	L	L	T	R	C	M	F	A	Y	K	L	G	L	N	D	L	P	Q	S	V	A	F	F	S	A
Template Known Secondary structure								S	S	S										T	T								S	T	T																							T	T	S	S				T	T	T	S			S
Template Predicted Secondary structure
Template SS confidence
		1116	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions