Return to main results Retrieve Phyre Job Id

Job DescriptionQ46793
Confidence36.96%DateThu Jan 5 12:34:14 GMT 2012
Rank6Aligned Residues35
% Identity20%Templatec2yhbA_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:post-transcriptional gene silencing protein qde-2; PDBTitle: crystal structure of the n. crassa qde-2 ago mid-piwi domains
Resolution3.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   182.......190....... ..200 .........210......
Predicted Secondary structure 




..
.
Query SS confidence 















. .


.















Query Sequence  FVDNCEQYLINNHCFS. . PDK. VNEICEQARHYLVEKM
Query Conservation 

      
       ..

 .     

    

   
Alig confidence 















..


.















Template Conservation     
 

 

  

 
  
 


   
 


 

    
Template Sequence  KAADTLEQLTHDMCYLCPPAYYADLVCDRARIHQKELF
Template Known Secondary structure  GT


Template Predicted Secondary structure 






Template SS confidence 





































   857..860.........870.........880.........890....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions